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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:442.6 nTPM
FANTOM5:878.2 Scaled Tags Per Million
Pig:375.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001462Antibody CAB000157
Glial cells LowLow
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 442.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 442.6
Samples: 246

Max nTPM: 738.6
Min nTPM: 221.9
Std nTPM: 123.2
Median nTPM: 428.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 738.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 727.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 722.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 720.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 710.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 704.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 703.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 696.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 696.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 693.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 688.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 686.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 684.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 670.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 667.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 666.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 659.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 656.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 648.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 627.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 625.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 624.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 624.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 622.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 621.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 620.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 620.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 607.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 604.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 600.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 598.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 597.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 595.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 595.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 595.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 594.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 586.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 585.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 580.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 580.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 575.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 575.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 573.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 572.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 572.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 568.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 567.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 565.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 562.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 553.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 549.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 546.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 545.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 542.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 533.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 530.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 529.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 528.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 527.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 525.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 524.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 523.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 523.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 521.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 514.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 513.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 512.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 511.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 510.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 510.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 507.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 505.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 505.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 503.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 502.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 497.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 496.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 495.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 495.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 494.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 494.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 490.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 488.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 487.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 486.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 485.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 483.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 482.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 477.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 477.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 477.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 476.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 475.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 475.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 470.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 469.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 469.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 468.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 467.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 466.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 464.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 461.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 460.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 460.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 458.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 456.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 453.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 452.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 452.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 451.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 450.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 446.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 446.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 446.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 443.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 442.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 437.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 434.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 433.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 431.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 430.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 430.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 429.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 428.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 428.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 426.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 423.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 423.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 422.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 422.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 417.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 415.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 412.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 411.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 410.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 410.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 408.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 408.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 407.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 406.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 406.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 404.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 402.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 401.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 400.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 399.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 398.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 392.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 392.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 391.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 391.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 389.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 388.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 388.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 384.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 383.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 382.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 379.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 379.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 377.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 376.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 375.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 375.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 373.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 373.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 371.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 370.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 367.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 366.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 366.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 366.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 363.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 361.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 360.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 359.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 355.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 353.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 353.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 352.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 351.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 349.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 348.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 347.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 346.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 346.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 346.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 342.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 341.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 340.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 340.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 339.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 337.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 336.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 335.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 333.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 333.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 331.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 328.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 326.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 323.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 323.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 319.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 319.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 315.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 315.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 314.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 311.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 310.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 310.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 309.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 306.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 306.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 306.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 303.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 302.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 302.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 302.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 300.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 297.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 292.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 287.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 287.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 286.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 283.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 279.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 279.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 273.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 271.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 270.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 268.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 267.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 265.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 265.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 264.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 258.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 256.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 255.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 254.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 252.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 250.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 250.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 248.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 243.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 240.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 236.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 221.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 878.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 878.2
FF:10164-103B2 76 years, female 878.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 375.9
Pig sample Sample description nTPM
Caudate
nTPM: 375.9
Samples: 4

Max nTPM: 437.1
Min nTPM: 335.6
Sample A Female 335.6
Sample B Female 357.1
Sample C Male 437.1
Sample D Male 373.8

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