HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.2 nTPM
HPA:45.2 nTPM
GTEx:49.7 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:98.9 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002891Antibody CAB003765
Glial cells MediumLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.2
Sample id Sample description nTPM
Hippocampus
nTPM: 45.2
2621 Female, age 67, right hemisphere 48.6
2529 Female, age 94, left hemisphere 47.0
2148 Female, age 91, left hemisphere 46.1
1898 Male, age 80, left hemisphere 44.4
1911 Female, age 85, right hemisphere 43.3
1855 Male, age 76, left hemisphere 41.8
Dentate gyrus
nTPM: 43.3
2530 Female, age 94, left hemisphere 46.2
2531 Female, age 67, both hemispheres 46.1
2528 Male, age 74, both hemispheres 42.7
2010 Male, age 76, both hemispheres 42.3
2246 Female, age 85, both hemispheres 42.2
1927 Female, age 91, both hemispheres 40.4
Entorhinal gyrus
nTPM: 44.2
2613 Female, age 94, left hemisphere 47.9
2117 Female, age 91, right hemisphere 44.9
1787 Male, age 76, left hemisphere 43.6
2686 Male, age 75, right hemisphere 43.4
2764 Male, age 80, right hemisphere 43.1
1938 Female, age 85, left hemisphere 42.5
Hippocampus, CA1
nTPM: 43.2
2749 Male, age 80, left hemisphere 45.7
2527 Male, age 74, both hemispheres 45.3
2082 Female, age 91, right hemisphere 42.8
1873 Female, age 85, both hemispheres 42.3
2045 Male, age 76, both hemispheres 39.9
Hippocampus, CA2
nTPM: 43.4
2437 Female, age 94, left hemisphere 46.5
1963 Male, age 80, left hemisphere 45.6
2113 Female, age 91, right hemisphere 44.2
1892 Male, age 76, both hemispheres 42.4
2249 Male, age 74, both hemispheres 42.1
1940 Female, age 85, left hemisphere 39.3
Hippocampus, CA3
nTPM: 44.3
2861 Female, age 67, both hemispheres 50.4
2137 Male, age 80, left hemisphere 46.0
2436 Male, age 74, both hemispheres 45.1
1867 Male, age 76, both hemispheres 42.2
2620 Female, age 94, left hemisphere 42.1
1891 Female, age 85, both hemispheres 40.0
Parahippocampal cortex
nTPM: 42.3
2245 Female, age 91, both hemispheres 45.9
2622 Female, age 67, right hemisphere 44.0
2532 Female, age 72, left hemisphere 43.1
2018 Male, age 76, both hemispheres 43.0
2250 Female, age 67, right hemisphere 42.8
2692 Male, age 74, both hemispheres 42.6
1990 Female, age 91, right hemisphere 41.0
1933 Female, age 85, both hemispheres 40.5
1850 Male, age 80, both hemispheres 39.9
2693 Female, age 94, both hemispheres 39.9
Perirhinal gyrus
nTPM: 42.4
2521 Female, age 94, right hemisphere 44.6
1794 Male, age 80, right hemisphere 43.0
1847 Female, age 91, left hemisphere 42.3
1841 Female, age 85, right hemisphere 41.1
2848 Male, age 76, right hemisphere 40.8
Subiculum
nTPM: 42.7
2438 Female, age 94, left hemisphere 45.0
2619 Male, age 74, both hemispheres 44.1
2042 Male, age 76, both hemispheres 42.0
1901 Male, age 80, both hemispheres 41.9
1977 Female, age 85, both hemispheres 41.6
2729 Female, age 91, right hemisphere 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.7
Samples: 197

Max nTPM: 79.4
Min nTPM: 23.0
Std nTPM: 8.5
Median nTPM: 48.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 79.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 75.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 73.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 73.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 72.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 70.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 68.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 68.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 64.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10153-102I9 76 years, female 32.8
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 37.8
Min nTPM: 15.8
Sample A Female 37.8
Sample B Female 31.5
Sample C Male 32.0
Sample D Male 15.8
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 45.4
Min nTPM: 29.5
Sample A Female 40.3
Sample B Female 41.9
Sample C Male 45.4
Sample D Male 29.5
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 48.7
Min nTPM: 29.2
Sample A Female 48.7
Sample B Female 35.7
Sample C Male 33.9
Sample D Male 29.2
Ventral hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 45.6
Min nTPM: 30.5
Sample A Female 35.1
Sample B Female 30.5
Sample C Male 45.6
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.8
Samples: 4

Max nTPM: 103.1
Min nTPM: 89.8
Sample A Male 103.1
Sample B Male 89.8
Sample C Female 95.5
Sample D Female 90.6
Hippocampal formation
nTPM: 99.0
Samples: 4

Max nTPM: 103.7
Min nTPM: 95.2
Sample A Male 100.5
Sample B Male 95.2
Sample C Female 96.4
Sample D Female 103.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
75988255 Antisense, RP_060606_02_E05, Mouse strain C57BL/6J (56 days, male) 8.2

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