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  • PSMB6
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:99.6 nTPM
FANTOM5:111.2 Scaled Tags Per Million
Pig:59.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023312
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 99.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 99.6
Samples: 246

Max nTPM: 209.4
Min nTPM: 54.2
Std nTPM: 24.3
Median nTPM: 94.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 209.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 201.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 188.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 184.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 181.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 178.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 174.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 156.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 153.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 152.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 146.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 144.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 144.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 143.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 143.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 142.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 142.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 142.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 140.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 136.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 136.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 135.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 134.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 132.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 132.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 128.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 128.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 124.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 123.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 123.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 121.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 121.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 121.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 120.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 120.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 120.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 118.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 117.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 117.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 116.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 116.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 116.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 115.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 114.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 114.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 113.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 112.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 111.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 111.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 111.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 110.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 110.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 110.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 110.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 110.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 109.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 109.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 109.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 109.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 109.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 108.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 108.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 108.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 108.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 108.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 107.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 107.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 106.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 106.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 106.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 106.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 106.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 106.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 105.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 105.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 105.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 104.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 104.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 104.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 104.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 104.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 103.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 103.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 103.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 102.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 102.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 101.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 101.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 101.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 101.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 100.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 100.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 100.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 99.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 99.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 99.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 99.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 99.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 98.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 98.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 98.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 98.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 97.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 97.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 97.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 96.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 96.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 96.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 96.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 95.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 95.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 95.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 94.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 94.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 94.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 94.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 94.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 94.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 94.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 94.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 93.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 93.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 93.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 93.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 92.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 92.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 92.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 92.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 92.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 91.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 91.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 91.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 91.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 91.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 91.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 90.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 90.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 90.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 90.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 90.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 90.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 89.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 89.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 89.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 89.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 89.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 88.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 87.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 87.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 87.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 87.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 87.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 87.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 86.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 86.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 86.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 86.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 86.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 86.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 85.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 85.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 85.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 85.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 85.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 85.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 85.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 85.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 84.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 84.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 84.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 84.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 84.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 84.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 83.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 83.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 83.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 82.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 82.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 82.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 82.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 82.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 81.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 81.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 81.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 81.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 81.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 80.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 80.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 80.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 80.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 80.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 79.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 79.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 79.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 79.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 79.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 78.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 78.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 78.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 77.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 77.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 77.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 76.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 74.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 72.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 72.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 71.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 71.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 71.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 70.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 70.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 67.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 66.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 65.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 62.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 59.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 54.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 111.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 111.2
FF:10164-103B2 76 years, female 111.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.6
Pig sample Sample description nTPM
Caudate
nTPM: 59.6
Samples: 4

Max nTPM: 68.7
Min nTPM: 48.9
Sample A Female 56.2
Sample B Female 64.5
Sample C Male 68.7
Sample D Male 48.9

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