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SH3BGRL3
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  • SH3BGRL3
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:139.6 nTPM
HPA:137.8 nTPM
GTEx:139.6 nTPM
FANTOM5:488.1 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA030848
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 137.8
overview
Female, age 68
Salivary gland sample 216
nTPM: 156.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 118.7
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 137.9
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.6
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 139.6
Samples: 162

Max nTPM: 598.9
Min nTPM: 62.9
Std nTPM: 95.8
Median nTPM: 103.3
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 598.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 543.8
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 502.6
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 480.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 444.9
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 406.6
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 402.8
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 392.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 356.5
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 312.5
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 308.4
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 304.7
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 293.1
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 288.0
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 276.8
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 260.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 259.3
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 242.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 231.8
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 230.2
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 227.2
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 210.2
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 205.5
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 202.9
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 200.9
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 198.0
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 195.9
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 185.0
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 183.5
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 177.6
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 172.6
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 165.1
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 160.0
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 158.9
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 158.7
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 158.3
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 158.0
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 157.6
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 156.0
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 153.1
GTEX-X261-2426-SM-4PQZU 50-59 years, male 151.1
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 148.1
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 145.2
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 145.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 140.1
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 137.8
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 137.7
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 137.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 132.8
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 132.2
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 130.1
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 129.9
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 129.3
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 128.1
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 128.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 127.1
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 127.0
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 126.5
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 125.8
GTEX-11P82-0926-SM-5986X 20-29 years, male 121.2
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 120.3
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 119.9
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 119.4
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 118.5
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 117.8
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 116.9
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 115.0
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 113.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 113.6
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 113.0
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 109.1
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 109.1
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 108.3
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 107.7
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 106.9
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 105.7
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 105.3
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 105.1
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 104.9
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 104.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 103.4
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 103.1
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 102.9
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 102.3
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 102.3
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 102.1
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 102.0
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 100.4
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 100.3
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 100.3
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 99.6
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 99.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 98.7
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 98.3
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 98.2
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 98.2
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 98.0
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 97.9
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 97.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 97.3
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 97.0
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 96.6
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 96.5
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 95.9
GTEX-13113-1526-SM-5EGHV 60-69 years, female 95.8
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 94.4
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 94.2
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 94.1
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 94.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 93.3
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 93.0
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 92.8
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 92.2
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 92.1
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 92.0
GTEX-178AV-1426-SM-6LLID 40-49 years, male 90.6
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 89.5
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 88.9
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 87.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 86.3
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 86.1
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 84.4
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 83.6
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 82.2
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 82.0
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 81.5
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 80.3
GTEX-Y111-2626-SM-4TT24 50-59 years, male 80.0
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 80.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 79.7
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 79.3
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 79.2
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 79.0
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 78.3
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 78.1
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 77.7
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 77.5
GTEX-15SHV-2226-SM-6M464 60-69 years, male 77.1
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 76.4
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 76.0
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 75.6
GTEX-1445S-2926-SM-5O993 60-69 years, male 75.6
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 75.3
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 74.7
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 73.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 73.0
GTEX-13O21-1926-SM-5MR39 50-59 years, male 72.7
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 72.7
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 70.8
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 70.2
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 70.0
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 67.9
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 67.8
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 67.6
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 67.0
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 66.4
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 66.2
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 65.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 64.2
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 64.0
GTEX-1B932-0626-SM-731EM 40-49 years, female 63.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 62.9
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 488.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 488.1
FF:10199-103F1 23 years, male 488.1
Salivary gland
Scaled Tags Per Million: 323.6
FF:10093-102C3 16-60 years, mixed 323.6
Submaxillary gland
Scaled Tags Per Million: 345.9
FF:10202-103F4 24 years, male 345.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.