HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:326.4 nTPM
HPA:326.4 nTPM
GTEx:389.6 nTPM
FANTOM5:1249.8 Scaled Tags Per Million
Pig:563.7 nTPM
Mouse:1542.9 nTPM
Allen mouse:27.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012911
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 326.4
Sample id Sample description nTPM
Hippocampus
nTPM: 253.5
1898 Male, age 80, left hemisphere 389.7
1855 Male, age 76, left hemisphere 297.8
2621 Female, age 67, right hemisphere 278.1
2148 Female, age 91, left hemisphere 214.4
1911 Female, age 85, right hemisphere 212.3
2529 Female, age 94, left hemisphere 128.5
Dentate gyrus
nTPM: 294.6
1927 Female, age 91, both hemispheres 408.3
2530 Female, age 94, left hemisphere 369.1
2010 Male, age 76, both hemispheres 345.5
2246 Female, age 85, both hemispheres 232.5
2528 Male, age 74, both hemispheres 225.1
2531 Female, age 67, both hemispheres 187.1
Entorhinal gyrus
nTPM: 169.5
1938 Female, age 85, left hemisphere 202.7
2764 Male, age 80, right hemisphere 201.6
1787 Male, age 76, left hemisphere 184.2
2613 Female, age 94, left hemisphere 169.5
2117 Female, age 91, right hemisphere 156.9
2686 Male, age 75, right hemisphere 101.9
Hippocampus, CA1
nTPM: 326.4
2749 Male, age 80, left hemisphere 599.7
1873 Female, age 85, both hemispheres 387.5
2045 Male, age 76, both hemispheres 272.1
2527 Male, age 74, both hemispheres 213.3
2082 Female, age 91, right hemisphere 159.2
Hippocampus, CA2
nTPM: 279.0
1892 Male, age 76, both hemispheres 455.3
1963 Male, age 80, left hemisphere 397.3
2249 Male, age 74, both hemispheres 272.3
2437 Female, age 94, left hemisphere 240.0
1940 Female, age 85, left hemisphere 160.3
2113 Female, age 91, right hemisphere 149.1
Hippocampus, CA3
nTPM: 278.5
2137 Male, age 80, left hemisphere 385.0
2436 Male, age 74, both hemispheres 349.2
1867 Male, age 76, both hemispheres 340.9
1891 Female, age 85, both hemispheres 235.5
2620 Female, age 94, left hemisphere 205.5
2861 Female, age 67, both hemispheres 155.1
Parahippocampal cortex
nTPM: 189.7
2250 Female, age 67, right hemisphere 240.6
1990 Female, age 91, right hemisphere 232.9
2245 Female, age 91, both hemispheres 229.0
1850 Male, age 80, both hemispheres 215.0
1933 Female, age 85, both hemispheres 207.9
2018 Male, age 76, both hemispheres 197.8
2693 Female, age 94, both hemispheres 187.4
2532 Female, age 72, left hemisphere 172.9
2692 Male, age 74, both hemispheres 123.0
2622 Female, age 67, right hemisphere 90.3
Perirhinal gyrus
nTPM: 227.8
1847 Female, age 91, left hemisphere 276.5
2521 Female, age 94, right hemisphere 263.0
1841 Female, age 85, right hemisphere 206.9
1794 Male, age 80, right hemisphere 203.9
2848 Male, age 76, right hemisphere 188.5
Subiculum
nTPM: 211.2
1901 Male, age 80, both hemispheres 291.3
1977 Female, age 85, both hemispheres 242.9
2042 Male, age 76, both hemispheres 219.6
2438 Female, age 94, left hemisphere 206.8
2729 Female, age 91, right hemisphere 161.6
2619 Male, age 74, both hemispheres 144.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 389.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 389.6
Samples: 197

Max nTPM: 1315.9
Min nTPM: 78.9
Std nTPM: 222.8
Median nTPM: 355.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1315.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1141.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1074.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 933.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 902.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 887.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 842.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 832.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 818.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 780.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 772.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1249.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1249.8
FF:10169-103B7 60 years, female 1888.6
FF:10153-102I9 76 years, female 610.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 563.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 563.7
Samples: 4

Max nTPM: 714.1
Min nTPM: 400.6
Sample A Female 714.1
Sample B Female 585.7
Sample C Male 554.4
Sample D Male 400.6
Entorhinal cortex
nTPM: 398.3
Samples: 4

Max nTPM: 485.9
Min nTPM: 343.5
Sample A Female 413.8
Sample B Female 485.9
Sample C Male 343.5
Sample D Male 350.1
Subiculum
nTPM: 361.1
Samples: 4

Max nTPM: 431.3
Min nTPM: 298.7
Sample A Female 431.3
Sample B Female 302.5
Sample C Male 411.9
Sample D Male 298.7
Ventral hippocampus
nTPM: 551.0
Samples: 4

Max nTPM: 687.9
Min nTPM: 355.7
Sample A Female 687.9
Sample B Female 355.7
Sample C Male 618.8
Sample D Male 541.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1542.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1243.6
Samples: 4

Max nTPM: 1306.1
Min nTPM: 1205.2
Sample A Male 1220.9
Sample B Male 1242.1
Sample C Female 1306.1
Sample D Female 1205.2
Hippocampal formation
nTPM: 1543.0
Samples: 4

Max nTPM: 1646.0
Min nTPM: 1420.9
Sample A Male 1523.4
Sample B Male 1581.5
Sample C Female 1646.0
Sample D Female 1420.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.7
68546368 Antisense, RP_050120_02_D04, Mouse strain C57BL/6J (56 days, male) 33.2
70919203 Antisense, RP_050712_04_D08, Mouse strain C57BL/6J (56 days, male) 22.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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