HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.8 nTPM
HPA:36.8 nTPM
GTEx:74.2 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:30.7 nTPM
Mouse:60.6 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056091
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
1898 Male, age 80, left hemisphere 35.6
1855 Male, age 76, left hemisphere 33.2
2148 Female, age 91, left hemisphere 31.2
2621 Female, age 67, right hemisphere 30.5
1911 Female, age 85, right hemisphere 29.9
2529 Female, age 94, left hemisphere 28.5
Dentate gyrus
nTPM: 32.7
1927 Female, age 91, both hemispheres 35.1
2010 Male, age 76, both hemispheres 34.3
2530 Female, age 94, left hemisphere 32.7
2246 Female, age 85, both hemispheres 31.8
2528 Male, age 74, both hemispheres 31.8
2531 Female, age 67, both hemispheres 30.6
Entorhinal gyrus
nTPM: 31.2
2613 Female, age 94, left hemisphere 33.0
1787 Male, age 76, left hemisphere 32.9
1938 Female, age 85, left hemisphere 32.7
2764 Male, age 80, right hemisphere 31.4
2686 Male, age 75, right hemisphere 29.4
2117 Female, age 91, right hemisphere 28.1
Hippocampus, CA1
nTPM: 33.7
2749 Male, age 80, left hemisphere 37.6
2045 Male, age 76, both hemispheres 37.3
1873 Female, age 85, both hemispheres 34.2
2527 Male, age 74, both hemispheres 30.5
2082 Female, age 91, right hemisphere 29.0
Hippocampus, CA2
nTPM: 31.7
1892 Male, age 76, both hemispheres 38.3
1963 Male, age 80, left hemisphere 31.1
2437 Female, age 94, left hemisphere 31.1
2249 Male, age 74, both hemispheres 30.9
1940 Female, age 85, left hemisphere 29.9
2113 Female, age 91, right hemisphere 28.8
Hippocampus, CA3
nTPM: 33.1
2620 Female, age 94, left hemisphere 35.5
1867 Male, age 76, both hemispheres 35.1
2137 Male, age 80, left hemisphere 33.3
2436 Male, age 74, both hemispheres 32.6
1891 Female, age 85, both hemispheres 32.2
2861 Female, age 67, both hemispheres 29.8
Parahippocampal cortex
nTPM: 32.1
1850 Male, age 80, both hemispheres 35.6
2250 Female, age 67, right hemisphere 34.0
2018 Male, age 76, both hemispheres 32.9
1933 Female, age 85, both hemispheres 32.8
1990 Female, age 91, right hemisphere 32.8
2693 Female, age 94, both hemispheres 32.7
2532 Female, age 72, left hemisphere 30.5
2245 Female, age 91, both hemispheres 30.4
2622 Female, age 67, right hemisphere 29.8
2692 Male, age 74, both hemispheres 29.1
Perirhinal gyrus
nTPM: 36.8
1841 Female, age 85, right hemisphere 39.3
1794 Male, age 80, right hemisphere 38.0
1847 Female, age 91, left hemisphere 37.6
2521 Female, age 94, right hemisphere 36.1
2848 Male, age 76, right hemisphere 33.0
Subiculum
nTPM: 30.8
1977 Female, age 85, both hemispheres 33.4
1901 Male, age 80, both hemispheres 31.5
2042 Male, age 76, both hemispheres 30.7
2438 Female, age 94, left hemisphere 30.7
2619 Male, age 74, both hemispheres 29.5
2729 Female, age 91, right hemisphere 29.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.2
Samples: 197

Max nTPM: 229.4
Min nTPM: 36.9
Std nTPM: 21.0
Median nTPM: 72.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 229.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 141.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 118.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 117.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 117.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 115.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 111.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 107.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 107.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 107.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 106.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.2
FF:10169-103B7 60 years, female 64.8
FF:10153-102I9 76 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 32.7
Min nTPM: 29.6
Sample A Female 32.7
Sample B Female 29.6
Sample C Male 30.0
Sample D Male 30.5
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 29.3
Min nTPM: 27.5
Sample A Female 27.5
Sample B Female 29.3
Sample C Male 29.0
Sample D Male 27.8
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 24.8
Min nTPM: 24.1
Sample A Female 24.1
Sample B Female 24.2
Sample C Male 24.8
Sample D Male 24.4
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 32.4
Min nTPM: 22.6
Sample A Female 27.1
Sample B Female 26.7
Sample C Male 22.6
Sample D Male 32.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 63.8
Min nTPM: 49.7
Sample A Male 57.2
Sample B Male 63.8
Sample C Female 63.1
Sample D Female 49.7
Hippocampal formation
nTPM: 60.6
Samples: 4

Max nTPM: 67.5
Min nTPM: 53.2
Sample A Male 67.5
Sample B Male 56.8
Sample C Female 53.2
Sample D Female 65.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
79393535 Antisense, RP_071018_02_B02, Mouse strain C57BL/6J (56 days, male) 5.9

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