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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:220.9 nTPM
FANTOM5:287.1 Scaled Tags Per Million
Pig:201.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB007742
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 220.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 220.9
Samples: 246

Max nTPM: 373.8
Min nTPM: 137.0
Std nTPM: 39.7
Median nTPM: 223.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 373.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 343.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 313.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 304.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 302.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 300.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 300.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 293.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 293.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 293.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 289.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 289.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 286.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 278.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 278.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 277.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 276.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 275.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 273.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 273.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 273.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 272.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 271.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 271.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 271.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 270.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 268.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 267.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 267.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 266.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 266.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 266.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 265.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 264.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 263.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 262.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 261.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 261.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 260.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 259.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 259.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 259.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 259.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 258.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 257.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 257.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 256.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 255.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 254.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 254.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 254.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 253.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 253.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 252.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 252.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 250.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 250.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 249.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 249.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 249.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 249.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 249.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 248.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 248.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 247.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 246.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 245.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 245.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 244.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 243.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 243.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 241.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 241.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 241.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 241.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 240.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 240.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 239.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 239.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 238.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 238.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 237.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 237.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 236.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 236.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 236.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 235.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 233.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 233.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 232.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 232.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 232.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 231.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 231.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 231.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 231.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 231.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 230.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 230.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 230.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 230.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 230.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 230.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 228.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 228.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 228.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 228.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 227.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 227.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 227.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 226.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 226.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 226.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 226.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 226.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 226.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 224.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 224.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 224.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 224.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 224.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 223.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 223.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 222.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 221.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 221.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 221.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 221.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 220.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 220.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 219.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 219.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 219.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 219.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 219.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 218.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 217.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 215.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 214.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 214.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 214.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 213.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 212.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 211.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 211.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 211.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 210.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 210.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 209.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 209.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 209.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 208.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 208.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 207.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 205.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 204.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 203.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 203.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 203.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 202.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 201.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 201.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 200.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 200.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 199.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 199.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 198.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 198.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 198.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 197.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 197.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 196.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 194.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 194.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 193.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 193.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 193.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 193.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 192.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 192.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 192.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 191.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 190.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 190.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 190.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 190.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 189.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 189.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 188.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 188.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 187.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 187.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 187.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 186.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 186.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 185.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 184.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 184.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 183.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 183.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 182.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 181.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 181.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 179.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 179.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 178.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 178.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 178.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 178.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 176.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 176.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 176.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 175.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 175.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 174.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 174.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 173.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 171.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 169.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 168.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 167.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 166.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 165.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 165.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 164.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 164.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 163.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 162.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 160.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 158.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 157.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 157.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 157.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 156.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 154.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 153.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 152.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 151.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 147.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 147.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 146.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 145.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 144.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 143.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 137.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 287.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 287.1
FF:10164-103B2 76 years, female 287.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 201.8
Pig sample Sample description nTPM
Caudate
nTPM: 201.8
Samples: 4

Max nTPM: 232.7
Min nTPM: 181.1
Sample A Female 183.3
Sample B Female 210.0
Sample C Male 232.7
Sample D Male 181.1

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