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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1138.1 nTPM
FANTOM5:1053.4 Scaled Tags Per Million
Pig:2.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044999Antibody CAB007790
Glial cells Not detectedHigh
Neuronal cells MediumHigh




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1138.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1138.1
Samples: 246

Max nTPM: 2965.1
Min nTPM: 541.7
Std nTPM: 404.9
Median nTPM: 1037.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2965.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2768.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2563.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2204.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2144.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2140.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2082.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2000.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1971.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1971.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1961.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1931.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1907.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1857.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1847.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1842.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1767.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1758.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1743.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1737.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1726.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1711.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1711.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1704.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1684.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1660.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1652.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1640.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1639.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1624.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1618.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1617.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1601.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1595.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1584.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1520.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1515.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1505.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1499.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1496.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1490.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1489.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1489.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1465.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1463.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1459.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1448.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1447.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1443.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1434.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1427.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1421.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1419.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1409.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1408.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1407.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1405.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1401.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1390.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1386.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1368.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1368.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1354.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1351.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1350.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1349.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1348.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1342.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1336.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1335.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1334.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1329.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1328.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1310.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1284.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1280.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1278.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1276.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1273.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1273.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1269.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1265.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1263.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1258.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1245.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1241.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1218.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1209.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1195.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1192.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1185.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1177.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1172.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1165.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1164.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1163.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1162.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1162.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1153.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1151.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1142.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1136.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1135.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1134.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1134.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1130.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1128.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1124.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1121.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1116.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1115.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1106.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1105.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1093.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1089.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1087.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1076.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1055.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1051.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1046.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1043.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1040.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1038.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1037.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1035.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1034.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1032.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1030.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1026.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1024.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1019.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1019.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1011.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1007.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1006.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1001.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1001.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 996.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 993.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 992.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 990.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 989.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 982.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 974.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 969.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 969.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 963.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 961.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 958.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 955.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 953.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 948.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 948.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 946.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 945.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 943.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 932.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 929.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 928.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 927.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 923.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 920.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 912.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 912.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 912.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 911.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 903.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 902.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 900.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 897.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 897.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 889.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 887.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 882.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 881.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 879.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 877.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 874.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 870.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 869.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 867.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 856.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 851.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 845.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 845.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 837.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 830.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 825.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 814.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 813.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 812.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 806.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 805.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 801.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 801.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 782.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 780.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 778.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 775.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 770.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 768.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 763.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 758.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 758.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 755.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 748.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 747.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 739.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 735.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 735.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 734.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 734.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 729.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 726.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 722.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 711.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 709.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 709.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 704.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 700.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 698.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 697.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 697.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 691.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 691.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 686.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 677.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 677.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 671.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 667.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 663.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 662.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 659.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 650.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 642.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 639.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 636.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 626.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 623.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 609.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 606.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 596.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 588.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 575.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 571.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 541.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1053.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1053.4
FF:10164-103B2 76 years, female 1053.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2.7
Pig sample Sample description nTPM
Caudate
nTPM: 2.7
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.1
Sample A Female 3.4
Sample B Female 2.1
Sample C Male 2.7
Sample D Male 2.6

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