HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:184.3 nTPM
HPA:184.3 nTPM
GTEx:129.4 nTPM
FANTOM5:135.1 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:166.2 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001523Antibody CAB002775Antibody CAB072816
Glial cells MediumLowMedium
Neuronal cells MediumLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.3
Sample id Sample description nTPM
Hippocampus
nTPM: 182.9
1898 Male, age 80, left hemisphere 193.7
1855 Male, age 76, left hemisphere 187.0
2529 Female, age 94, left hemisphere 183.5
1911 Female, age 85, right hemisphere 178.2
2621 Female, age 67, right hemisphere 178.0
2148 Female, age 91, left hemisphere 176.8
Dentate gyrus
nTPM: 175.9
1927 Female, age 91, both hemispheres 179.4
2246 Female, age 85, both hemispheres 179.3
2530 Female, age 94, left hemisphere 178.6
2528 Male, age 74, both hemispheres 177.1
2010 Male, age 76, both hemispheres 172.7
2531 Female, age 67, both hemispheres 168.4
Entorhinal gyrus
nTPM: 176.4
1938 Female, age 85, left hemisphere 181.9
2117 Female, age 91, right hemisphere 181.5
1787 Male, age 76, left hemisphere 178.8
2686 Male, age 75, right hemisphere 177.6
2764 Male, age 80, right hemisphere 174.1
2613 Female, age 94, left hemisphere 164.4
Hippocampus, CA1
nTPM: 184.3
2749 Male, age 80, left hemisphere 198.4
1873 Female, age 85, both hemispheres 188.8
2527 Male, age 74, both hemispheres 187.5
2082 Female, age 91, right hemisphere 177.8
2045 Male, age 76, both hemispheres 168.9
Hippocampus, CA2
nTPM: 180.2
2249 Male, age 74, both hemispheres 190.8
1963 Male, age 80, left hemisphere 186.1
2113 Female, age 91, right hemisphere 178.2
1940 Female, age 85, left hemisphere 177.9
1892 Male, age 76, both hemispheres 176.2
2437 Female, age 94, left hemisphere 171.8
Hippocampus, CA3
nTPM: 180.3
2436 Male, age 74, both hemispheres 194.4
2137 Male, age 80, left hemisphere 186.4
1891 Female, age 85, both hemispheres 179.3
1867 Male, age 76, both hemispheres 176.3
2620 Female, age 94, left hemisphere 175.3
2861 Female, age 67, both hemispheres 170.2
Parahippocampal cortex
nTPM: 175.7
2250 Female, age 67, right hemisphere 181.4
1933 Female, age 85, both hemispheres 181.1
2245 Female, age 91, both hemispheres 180.2
1850 Male, age 80, both hemispheres 179.9
2692 Male, age 74, both hemispheres 177.4
1990 Female, age 91, right hemisphere 177.1
2622 Female, age 67, right hemisphere 172.8
2532 Female, age 72, left hemisphere 171.9
2018 Male, age 76, both hemispheres 170.7
2693 Female, age 94, both hemispheres 164.4
Perirhinal gyrus
nTPM: 173.7
1847 Female, age 91, left hemisphere 180.4
1841 Female, age 85, right hemisphere 179.4
1794 Male, age 80, right hemisphere 172.9
2521 Female, age 94, right hemisphere 168.0
2848 Male, age 76, right hemisphere 167.7
Subiculum
nTPM: 178.2
1901 Male, age 80, both hemispheres 187.2
1977 Female, age 85, both hemispheres 180.3
2619 Male, age 74, both hemispheres 179.5
2042 Male, age 76, both hemispheres 177.7
2729 Female, age 91, right hemisphere 174.2
2438 Female, age 94, left hemisphere 170.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.4
Samples: 197

Max nTPM: 916.4
Min nTPM: 62.2
Std nTPM: 85.8
Median nTPM: 107.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 916.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 527.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 493.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 450.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 356.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 352.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 298.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 297.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 264.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 264.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 250.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.1
FF:10153-102I9 76 years, female 168.7
FF:10169-103B7 60 years, female 101.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 70.3
Min nTPM: 47.2
Sample A Female 70.3
Sample B Female 54.5
Sample C Male 62.1
Sample D Male 47.2
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 60.0
Min nTPM: 43.0
Sample A Female 51.0
Sample B Female 60.0
Sample C Male 52.0
Sample D Male 43.0
Subiculum
nTPM: 58.3
Samples: 4

Max nTPM: 69.7
Min nTPM: 52.4
Sample A Female 69.7
Sample B Female 56.3
Sample C Male 52.4
Sample D Male 54.6
Ventral hippocampus
nTPM: 52.9
Samples: 4

Max nTPM: 55.6
Min nTPM: 47.5
Sample A Female 55.2
Sample B Female 47.5
Sample C Male 53.2
Sample D Male 55.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 166.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 162.3
Samples: 4

Max nTPM: 187.6
Min nTPM: 147.3
Sample A Male 147.3
Sample B Male 152.6
Sample C Female 161.8
Sample D Female 187.6
Hippocampal formation
nTPM: 166.2
Samples: 4

Max nTPM: 178.7
Min nTPM: 157.5
Sample A Male 157.5
Sample B Male 167.3
Sample C Female 178.7
Sample D Female 161.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
69169385 Antisense, RP_050321_03_D12, Mouse strain C57BL/6J (56 days, male) 10.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.