HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:36.8 nTPM
HPA:36.8 nTPM
GTEx:27.4 nTPM
FANTOM5:36.0 Scaled Tags Per Million
Pig:31.0 nTPM
Mouse:18.5 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.8
2529 Female, age 94, left hemisphere 39.4
1855 Male, age 76, left hemisphere 37.7
1911 Female, age 85, right hemisphere 36.2
1898 Male, age 80, left hemisphere 35.9
2148 Female, age 91, left hemisphere 35.9
2621 Female, age 67, right hemisphere 35.8
Dentate gyrus
nTPM: 35.3
2530 Female, age 94, left hemisphere 39.6
2528 Male, age 74, both hemispheres 36.6
2531 Female, age 67, both hemispheres 35.8
2010 Male, age 76, both hemispheres 34.9
2246 Female, age 85, both hemispheres 33.9
1927 Female, age 91, both hemispheres 31.0
Entorhinal gyrus
nTPM: 35.4
2117 Female, age 91, right hemisphere 40.8
2686 Male, age 75, right hemisphere 38.2
2764 Male, age 80, right hemisphere 35.2
1787 Male, age 76, left hemisphere 33.3
2613 Female, age 94, left hemisphere 33.1
1938 Female, age 85, left hemisphere 31.5
Hippocampus, CA1
nTPM: 33.3
2527 Male, age 74, both hemispheres 37.2
2082 Female, age 91, right hemisphere 34.2
1873 Female, age 85, both hemispheres 33.6
2045 Male, age 76, both hemispheres 32.3
2749 Male, age 80, left hemisphere 29.2
Hippocampus, CA2
nTPM: 34.9
2437 Female, age 94, left hemisphere 37.4
2113 Female, age 91, right hemisphere 37.0
1963 Male, age 80, left hemisphere 36.6
2249 Male, age 74, both hemispheres 33.7
1940 Female, age 85, left hemisphere 33.4
1892 Male, age 76, both hemispheres 31.0
Hippocampus, CA3
nTPM: 35.0
2861 Female, age 67, both hemispheres 43.5
1891 Female, age 85, both hemispheres 38.0
1867 Male, age 76, both hemispheres 34.5
2436 Male, age 74, both hemispheres 33.7
2620 Female, age 94, left hemisphere 31.5
2137 Male, age 80, left hemisphere 28.8
Parahippocampal cortex
nTPM: 33.4
2692 Male, age 74, both hemispheres 39.4
2622 Female, age 67, right hemisphere 35.6
2018 Male, age 76, both hemispheres 34.3
1990 Female, age 91, right hemisphere 33.3
2532 Female, age 72, left hemisphere 32.8
2245 Female, age 91, both hemispheres 32.5
2250 Female, age 67, right hemisphere 32.4
1933 Female, age 85, both hemispheres 31.6
1850 Male, age 80, both hemispheres 31.5
2693 Female, age 94, both hemispheres 30.7
Perirhinal gyrus
nTPM: 29.9
2521 Female, age 94, right hemisphere 30.7
1847 Female, age 91, left hemisphere 30.6
1794 Male, age 80, right hemisphere 30.4
2848 Male, age 76, right hemisphere 29.2
1841 Female, age 85, right hemisphere 28.6
Subiculum
nTPM: 36.8
2042 Male, age 76, both hemispheres 39.4
2729 Female, age 91, right hemisphere 38.3
2619 Male, age 74, both hemispheres 37.8
2438 Female, age 94, left hemisphere 36.8
1901 Male, age 80, both hemispheres 35.3
1977 Female, age 85, both hemispheres 33.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.4
Samples: 197

Max nTPM: 56.7
Min nTPM: 12.0
Std nTPM: 9.2
Median nTPM: 26.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 50.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 49.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 49.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 48.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 48.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 47.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 46.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 45.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.0
FF:10153-102I9 76 years, female 47.0
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 32.7
Min nTPM: 18.6
Sample A Female 29.9
Sample B Female 24.8
Sample C Male 32.7
Sample D Male 18.6
Entorhinal cortex
nTPM: 26.4
Samples: 4

Max nTPM: 32.4
Min nTPM: 21.4
Sample A Female 24.8
Sample B Female 26.9
Sample C Male 32.4
Sample D Male 21.4
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 36.1
Min nTPM: 28.1
Sample A Female 36.1
Sample B Female 28.5
Sample C Male 30.5
Sample D Male 28.1
Ventral hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 45.1
Min nTPM: 24.4
Sample A Female 28.5
Sample B Female 25.9
Sample C Male 45.1
Sample D Male 24.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 16.2
Sample A Male 17.3
Sample B Male 16.2
Sample C Female 16.5
Sample D Female 16.8
Hippocampal formation
nTPM: 18.5
Samples: 4

Max nTPM: 20.7
Min nTPM: 16.7
Sample A Male 17.1
Sample B Male 16.7
Sample C Female 19.4
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
73584759 Antisense, RP_051206_01_A10, Mouse strain C57BL/6J (56 days, male) 0.8

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