HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.7 nTPM
HPA:42.7 nTPM
GTEx:53.6 nTPM
FANTOM5:69.3 Scaled Tags Per Million
Pig:44.3 nTPM
Mouse:61.6 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038143Antibody HPA038144
Glial cells Not detectedLow
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.7
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1898 Male, age 80, left hemisphere 47.7
2529 Female, age 94, left hemisphere 46.3
2148 Female, age 91, left hemisphere 32.0
2621 Female, age 67, right hemisphere 29.6
1855 Male, age 76, left hemisphere 25.9
1911 Female, age 85, right hemisphere 10.1
Dentate gyrus
nTPM: 29.1
2530 Female, age 94, left hemisphere 37.3
2531 Female, age 67, both hemispheres 37.3
2528 Male, age 74, both hemispheres 31.9
1927 Female, age 91, both hemispheres 23.9
2010 Male, age 76, both hemispheres 23.4
2246 Female, age 85, both hemispheres 20.6
Entorhinal gyrus
nTPM: 42.7
2613 Female, age 94, left hemisphere 67.7
2764 Male, age 80, right hemisphere 55.5
2686 Male, age 75, right hemisphere 39.5
1787 Male, age 76, left hemisphere 36.4
1938 Female, age 85, left hemisphere 31.4
2117 Female, age 91, right hemisphere 26.0
Hippocampus, CA1
nTPM: 19.1
2527 Male, age 74, both hemispheres 28.3
2082 Female, age 91, right hemisphere 25.9
1873 Female, age 85, both hemispheres 16.7
2749 Male, age 80, left hemisphere 15.5
2045 Male, age 76, both hemispheres 9.2
Hippocampus, CA2
nTPM: 36.8
2437 Female, age 94, left hemisphere 73.6
1892 Male, age 76, both hemispheres 45.7
1963 Male, age 80, left hemisphere 42.8
2113 Female, age 91, right hemisphere 25.1
1940 Female, age 85, left hemisphere 20.1
2249 Male, age 74, both hemispheres 13.3
Hippocampus, CA3
nTPM: 26.3
2861 Female, age 67, both hemispheres 54.1
2620 Female, age 94, left hemisphere 33.0
1867 Male, age 76, both hemispheres 24.3
2137 Male, age 80, left hemisphere 18.2
1891 Female, age 85, both hemispheres 15.8
2436 Male, age 74, both hemispheres 12.5
Parahippocampal cortex
nTPM: 37.8
2622 Female, age 67, right hemisphere 62.4
2532 Female, age 72, left hemisphere 45.2
2245 Female, age 91, both hemispheres 40.1
1990 Female, age 91, right hemisphere 38.6
1850 Male, age 80, both hemispheres 36.5
2692 Male, age 74, both hemispheres 34.0
1933 Female, age 85, both hemispheres 32.0
2693 Female, age 94, both hemispheres 31.8
2018 Male, age 76, both hemispheres 29.3
2250 Female, age 67, right hemisphere 27.8
Perirhinal gyrus
nTPM: 35.9
1847 Female, age 91, left hemisphere 44.1
1794 Male, age 80, right hemisphere 43.1
2521 Female, age 94, right hemisphere 33.4
2848 Male, age 76, right hemisphere 30.6
1841 Female, age 85, right hemisphere 28.4
Subiculum
nTPM: 30.5
2438 Female, age 94, left hemisphere 63.0
2619 Male, age 74, both hemispheres 43.0
1977 Female, age 85, both hemispheres 30.3
1901 Male, age 80, both hemispheres 25.7
2729 Female, age 91, right hemisphere 19.4
2042 Male, age 76, both hemispheres 1.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.6
Samples: 197

Max nTPM: 194.2
Min nTPM: 12.2
Std nTPM: 27.1
Median nTPM: 45.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 194.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 157.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 138.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 136.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 123.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 123.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 121.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 111.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 108.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 107.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 105.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.3
FF:10153-102I9 76 years, female 91.6
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.5
Samples: 4

Max nTPM: 45.6
Min nTPM: 28.0
Sample A Female 45.6
Sample B Female 41.6
Sample C Male 38.9
Sample D Male 28.0
Entorhinal cortex
nTPM: 44.3
Samples: 4

Max nTPM: 46.1
Min nTPM: 40.9
Sample A Female 46.1
Sample B Female 40.9
Sample C Male 45.1
Sample D Male 45.1
Subiculum
nTPM: 35.3
Samples: 4

Max nTPM: 48.7
Min nTPM: 26.0
Sample A Female 48.7
Sample B Female 29.3
Sample C Male 37.1
Sample D Male 26.0
Ventral hippocampus
nTPM: 40.2
Samples: 4

Max nTPM: 50.0
Min nTPM: 28.2
Sample A Female 39.7
Sample B Female 28.2
Sample C Male 50.0
Sample D Male 42.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.6
Samples: 4

Max nTPM: 68.2
Min nTPM: 52.5
Sample A Male 64.1
Sample B Male 61.6
Sample C Female 52.5
Sample D Female 68.2
Hippocampal formation
nTPM: 55.7
Samples: 4

Max nTPM: 62.2
Min nTPM: 48.3
Sample A Male 48.3
Sample B Male 55.9
Sample C Female 62.2
Sample D Female 56.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70946251 Antisense, RP_050426_04_G06, Mouse strain C57BL/6J (56 days, male) 8.3
77332673 Antisense, RP_070116_02_B04, Mouse strain C57BL/6J (56 days, male) 5.0

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