HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1148.0 nTPM
HPA:1148.0 nTPM
GTEx:1279.6 nTPM
FANTOM5:25.1 Scaled Tags Per Million
Pig:168.5 nTPM
Mouse:794.5 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047501Antibody HPA051994
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1148.0
Sample id Sample description nTPM
Hippocampus
nTPM: 1145.5
2621 Female, age 67, right hemisphere 1171.4
2529 Female, age 94, left hemisphere 1170.1
1898 Male, age 80, left hemisphere 1150.3
1911 Female, age 85, right hemisphere 1141.9
1855 Male, age 76, left hemisphere 1136.4
2148 Female, age 91, left hemisphere 1103.0
Dentate gyrus
nTPM: 1143.2
2530 Female, age 94, left hemisphere 1180.6
2010 Male, age 76, both hemispheres 1164.5
2246 Female, age 85, both hemispheres 1145.4
2531 Female, age 67, both hemispheres 1140.8
2528 Male, age 74, both hemispheres 1121.0
1927 Female, age 91, both hemispheres 1107.1
Entorhinal gyrus
nTPM: 1131.6
2686 Male, age 75, right hemisphere 1160.6
1787 Male, age 76, left hemisphere 1150.0
2764 Male, age 80, right hemisphere 1126.1
1938 Female, age 85, left hemisphere 1125.2
2117 Female, age 91, right hemisphere 1118.3
2613 Female, age 94, left hemisphere 1109.2
Hippocampus, CA1
nTPM: 1128.9
2045 Male, age 76, both hemispheres 1153.9
1873 Female, age 85, both hemispheres 1129.8
2082 Female, age 91, right hemisphere 1127.8
2527 Male, age 74, both hemispheres 1121.6
2749 Male, age 80, left hemisphere 1111.5
Hippocampus, CA2
nTPM: 1130.6
1963 Male, age 80, left hemisphere 1158.7
2437 Female, age 94, left hemisphere 1142.1
1892 Male, age 76, both hemispheres 1141.1
2113 Female, age 91, right hemisphere 1122.3
2249 Male, age 74, both hemispheres 1114.8
1940 Female, age 85, left hemisphere 1104.8
Hippocampus, CA3
nTPM: 1117.7
1867 Male, age 76, both hemispheres 1149.5
1891 Female, age 85, both hemispheres 1144.8
2861 Female, age 67, both hemispheres 1118.4
2137 Male, age 80, left hemisphere 1109.2
2436 Male, age 74, both hemispheres 1097.6
2620 Female, age 94, left hemisphere 1086.3
Parahippocampal cortex
nTPM: 1131.0
2018 Male, age 76, both hemispheres 1201.7
2250 Female, age 67, right hemisphere 1149.4
2532 Female, age 72, left hemisphere 1144.7
1850 Male, age 80, both hemispheres 1132.5
2245 Female, age 91, both hemispheres 1122.4
1933 Female, age 85, both hemispheres 1121.9
2692 Male, age 74, both hemispheres 1120.9
1990 Female, age 91, right hemisphere 1118.0
2693 Female, age 94, both hemispheres 1101.5
2622 Female, age 67, right hemisphere 1097.2
Perirhinal gyrus
nTPM: 1146.6
1841 Female, age 85, right hemisphere 1161.7
1847 Female, age 91, left hemisphere 1158.0
2848 Male, age 76, right hemisphere 1152.9
1794 Male, age 80, right hemisphere 1139.6
2521 Female, age 94, right hemisphere 1120.6
Subiculum
nTPM: 1148.0
2042 Male, age 76, both hemispheres 1179.5
2438 Female, age 94, left hemisphere 1178.0
1977 Female, age 85, both hemispheres 1170.4
1901 Male, age 80, both hemispheres 1129.6
2729 Female, age 91, right hemisphere 1120.1
2619 Male, age 74, both hemispheres 1110.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1279.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1279.6
Samples: 197

Max nTPM: 3607.2
Min nTPM: 579.2
Std nTPM: 475.6
Median nTPM: 1156.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3607.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2958.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2798.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2782.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2683.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2546.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2465.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2343.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2318.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2297.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2201.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.1
FF:10153-102I9 76 years, female 27.1
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 168.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 168.5
Samples: 4

Max nTPM: 225.3
Min nTPM: 116.4
Sample A Female 225.3
Sample B Female 158.0
Sample C Male 174.4
Sample D Male 116.4
Entorhinal cortex
nTPM: 139.7
Samples: 4

Max nTPM: 166.3
Min nTPM: 105.3
Sample A Female 122.1
Sample B Female 166.3
Sample C Male 165.2
Sample D Male 105.3
Subiculum
nTPM: 137.3
Samples: 4

Max nTPM: 194.4
Min nTPM: 108.5
Sample A Female 194.4
Sample B Female 135.0
Sample C Male 111.3
Sample D Male 108.5
Ventral hippocampus
nTPM: 143.6
Samples: 4

Max nTPM: 153.5
Min nTPM: 129.9
Sample A Female 138.8
Sample B Female 129.9
Sample C Male 152.1
Sample D Male 153.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 794.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 775.0
Samples: 4

Max nTPM: 841.4
Min nTPM: 746.3
Sample A Male 764.8
Sample B Male 747.4
Sample C Female 841.4
Sample D Female 746.3
Hippocampal formation
nTPM: 794.5
Samples: 4

Max nTPM: 944.6
Min nTPM: 720.0
Sample A Male 944.6
Sample B Male 738.5
Sample C Female 720.0
Sample D Female 775.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
75934920 Antisense, RP_060530_01_E12, Mouse strain C57BL/6J (56 days, male) 9.1
69012729 Antisense, RP_050309_01_D03, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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