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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 766.7
Min nTPM: 243.2
Std nTPM: 93.3
Median nTPM:
218_1
71 years, female
766.7
321_1
62 years, female
739.7
41_1
94 years, female
708.3
379_1
60 years, male
706.6
320_1
89 years, female
689.9
447_1
81 years, male
673.1
322_1
76 years, male
652.6
173_1
67 years, male
646.0
406_1
79 years, male
644.8
35_1
74 years, female
639.4
153_1
70 years, female
639.0
347_1
72 years, male
633.2
389_1
86 years, female
632.7
384_1
83 years, male
625.7
319_1
81 years, male
624.0
189_1
76 years, male
620.9
307_1
66 years, female
620.0
376_1
75 years, female
617.4
375_1
74 years, female
616.9
452_1
88 years, female
612.6
120_1
70 years, female
612.1
394_1
75 years, female
608.3
246_1
77 years, male
604.3
17_1
71 years, male
599.6
404_1
82 years, female
596.2
377_1
82 years, female
590.5
237_1
82 years, male
589.7
6_1
73 years, female
587.2
317_1
60 years, male
586.8
4_1
88 years, female
586.5
177_1
74 years, male
578.2
495_1
57 years, female
578.1
243_1
75 years, male
569.9
405_1
91 years, male
569.3
386_1
76 years, male
561.0
354_1
81 years, female
557.4
355_1
70 years, female
556.7
315_1
62 years, female
555.6
145_1
84 years, male
552.5
311_1
78 years, male
552.2
526_1
61 years, male
552.0
126_1
63 years, male
551.9
349_1
83 years, male
550.2
266_1
85 years, male
547.5
308_1
70 years, female
547.1
172_1
72 years, female
546.3
335_1
73 years, female
543.9
396_1
62 years, male
542.4
316_1
62 years, male
540.6
2_1
77 years, female
540.0
99_1
64 years, male
535.0
119_1
70 years, female
524.8
318_1
68 years, male
519.2
137_1
83 years, male
518.0
295_1
61 years, female
517.2
139_1
64 years, female
512.0
351_1
91 years, male
509.1
425_1
59 years, female
502.5
254_1
77 years, female
501.9
414_1
84 years, female
495.6
350_1
84 years, female
493.5
286_1
68 years, female
491.2
229_1
69 years, female
488.2
518_1
75 years, female
486.9
499_1
55 years, female
483.9
313_1
79 years, female
481.2
265_1
87 years, male
480.3
163_1
78 years, male
478.6
324_1
76 years, male
475.9
415_1
77 years, female
474.2
142_1
61 years, female
472.5
109_1
81 years, female
469.9
353_1
82 years, female
469.8
352_1
62 years, male
468.8
480_1
63 years, male
468.5
115_1
83 years, male
467.3
291_1
76 years, male
466.8
251_1
78 years, male
465.7
292_1
71 years, male
463.0
503_1
68 years, male
460.7
314_1
67 years, male
459.9
506_1
65 years, male
458.8
468_1
89 years, male
457.5
288_1
66 years, female
456.0
42_1
85 years, male
448.8
356_1
87 years, female
448.2
293_1
68 years, female
443.3
264_1
73 years, female
442.7
117_1
61 years, male
440.3
348_1
84 years, male
437.0
18_1
88 years, male
436.8
517_1
88 years, male
436.3
162_1
79 years, female
436.2
217_1
76 years, male
421.1
81_1
67 years, male
409.9
413_1
59 years, female
403.8
9_1
66 years, female
402.0
466_1
57 years, female
399.0
501_1
88 years, male
384.4
32_1
67 years, male
371.0
491_1
89 years, female
367.3
490_1
67 years, female
364.6
89_1
63 years, male
334.4
43_1
64 years, female
297.0
149_1
88 years, male
243.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.