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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2486.8 nTPM
GTEx:2486.8 nTPM
FANTOM5:65.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047100
Squamous epithelial cells Medium


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2486.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2486.8
Samples: 156

Max nTPM: 7236.1
Min nTPM: 1244.0
Std nTPM: 710.7
Median nTPM: 2477.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 7236.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 5249.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 5118.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 3839.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 3781.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 3647.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 3443.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 3380.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 3364.7
GTEX-16NPV-2526-SM-6M483 50-59 years, female 3275.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 3256.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 3206.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3197.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3195.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 3183.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 3177.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 3153.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 3134.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3099.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 3076.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 3064.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 3049.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 3034.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 3025.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 3007.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2965.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2944.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 2940.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2938.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2932.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2914.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2893.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2880.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 2868.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2868.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2862.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2837.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2834.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2824.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 2822.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2818.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 2801.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2793.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 2791.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2788.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2766.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2749.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2735.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2727.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 2719.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2717.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2711.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2674.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2662.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 2649.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 2641.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2640.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2635.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2629.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 2596.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 2583.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2579.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 2574.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2564.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 2564.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2559.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2550.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 2549.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2546.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2538.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2524.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 2517.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2515.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2511.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2508.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 2500.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2496.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2486.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2467.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2462.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 2438.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 2401.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 2380.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 2339.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 2318.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2316.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2269.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 2267.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 2262.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 2257.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 2230.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 2221.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 2216.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 2214.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2210.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2206.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2203.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 2199.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2179.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 2170.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 2160.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 2152.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 2142.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2128.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 2125.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 2124.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2115.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 2097.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2097.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 2092.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2085.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2075.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2052.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2050.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 2047.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2041.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 2036.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2036.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 2030.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1993.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1993.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1962.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1945.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1940.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1927.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1901.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1899.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1891.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1887.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1877.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1847.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1833.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1820.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1818.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1818.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1815.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1792.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1790.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1781.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1781.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1762.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1757.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1753.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1734.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1731.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1727.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1724.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1715.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1708.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1683.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1632.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1611.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1595.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1473.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1395.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1244.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 65.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 65.9
FF:10204-103F6 68 years, female 65.9

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