HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:572.4 nTPM
HPA:572.4 nTPM
GTEx:248.7 nTPM
FANTOM5:68.5 Scaled Tags Per Million
Pig:221.4 nTPM
Mouse:295.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 572.4
Sample id Sample description nTPM
Hippocampus
nTPM: 570.7
2529 Female, age 94, left hemisphere 582.3
2621 Female, age 67, right hemisphere 579.6
1911 Female, age 85, right hemisphere 568.4
1898 Male, age 80, left hemisphere 567.5
1855 Male, age 76, left hemisphere 565.0
2148 Female, age 91, left hemisphere 561.3
Dentate gyrus
nTPM: 571.4
2530 Female, age 94, left hemisphere 600.3
2246 Female, age 85, both hemispheres 572.8
2010 Male, age 76, both hemispheres 572.4
2531 Female, age 67, both hemispheres 567.6
1927 Female, age 91, both hemispheres 558.5
2528 Male, age 74, both hemispheres 556.6
Entorhinal gyrus
nTPM: 566.3
1787 Male, age 76, left hemisphere 574.6
2686 Male, age 75, right hemisphere 573.6
2764 Male, age 80, right hemisphere 568.9
1938 Female, age 85, left hemisphere 563.9
2117 Female, age 91, right hemisphere 563.9
2613 Female, age 94, left hemisphere 552.8
Hippocampus, CA1
nTPM: 566.8
2045 Male, age 76, both hemispheres 571.1
2527 Male, age 74, both hemispheres 568.3
1873 Female, age 85, both hemispheres 566.9
2082 Female, age 91, right hemisphere 564.7
2749 Male, age 80, left hemisphere 563.1
Hippocampus, CA2
nTPM: 567.4
2437 Female, age 94, left hemisphere 578.9
1963 Male, age 80, left hemisphere 570.8
1892 Male, age 76, both hemispheres 566.4
2113 Female, age 91, right hemisphere 564.5
2249 Male, age 74, both hemispheres 563.8
1940 Female, age 85, left hemisphere 559.7
Hippocampus, CA3
nTPM: 559.5
1867 Male, age 76, both hemispheres 570.2
1891 Female, age 85, both hemispheres 567.2
2137 Male, age 80, left hemisphere 559.1
2861 Female, age 67, both hemispheres 557.2
2436 Male, age 74, both hemispheres 556.0
2620 Female, age 94, left hemisphere 547.2
Parahippocampal cortex
nTPM: 565.7
2018 Male, age 76, both hemispheres 579.4
2532 Female, age 72, left hemisphere 576.2
2250 Female, age 67, right hemisphere 569.5
2245 Female, age 91, both hemispheres 567.1
1933 Female, age 85, both hemispheres 565.5
1990 Female, age 91, right hemisphere 564.2
1850 Male, age 80, both hemispheres 563.6
2692 Male, age 74, both hemispheres 562.7
2622 Female, age 67, right hemisphere 557.2
2693 Female, age 94, both hemispheres 551.5
Perirhinal gyrus
nTPM: 567.1
2848 Male, age 76, right hemisphere 572.4
1841 Female, age 85, right hemisphere 570.4
1794 Male, age 80, right hemisphere 569.0
1847 Female, age 91, left hemisphere 565.4
2521 Female, age 94, right hemisphere 558.1
Subiculum
nTPM: 572.4
2438 Female, age 94, left hemisphere 598.4
1977 Female, age 85, both hemispheres 579.2
2042 Male, age 76, both hemispheres 570.3
1901 Male, age 80, both hemispheres 564.0
2729 Female, age 91, right hemisphere 561.6
2619 Male, age 74, both hemispheres 560.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 248.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 248.7
Samples: 197

Max nTPM: 791.0
Min nTPM: 69.7
Std nTPM: 119.8
Median nTPM: 223.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 791.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 788.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 751.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 642.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 619.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 589.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 586.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 559.4
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 549.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 466.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 453.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.5
FF:10169-103B7 60 years, female 77.4
FF:10153-102I9 76 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 221.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 221.4
Samples: 4

Max nTPM: 282.8
Min nTPM: 143.0
Sample A Female 280.7
Sample B Female 179.2
Sample C Male 282.8
Sample D Male 143.0
Entorhinal cortex
nTPM: 193.3
Samples: 4

Max nTPM: 237.1
Min nTPM: 138.2
Sample A Female 177.3
Sample B Female 237.1
Sample C Male 220.4
Sample D Male 138.2
Subiculum
nTPM: 182.7
Samples: 4

Max nTPM: 274.7
Min nTPM: 140.6
Sample A Female 274.7
Sample B Female 165.9
Sample C Male 149.7
Sample D Male 140.6
Ventral hippocampus
nTPM: 192.4
Samples: 4

Max nTPM: 231.8
Min nTPM: 167.3
Sample A Female 203.0
Sample B Female 167.4
Sample C Male 231.8
Sample D Male 167.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 295.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 295.5
Samples: 4

Max nTPM: 320.6
Min nTPM: 260.8
Sample A Male 299.5
Sample B Male 300.9
Sample C Female 320.6
Sample D Female 260.8
Hippocampal formation
nTPM: 278.3
Samples: 4

Max nTPM: 355.9
Min nTPM: 240.6
Sample A Male 355.9
Sample B Male 274.8
Sample C Female 240.6
Sample D Female 241.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71280850 Antisense, RP_050818_01_G02, Mouse strain C57BL/6J (56 days, male) 0.3
70918802 Antisense, RP_050712_04_E08, Mouse strain C57BL/6J (56 days, male) 0.0

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