HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.5 nTPM
HPA:31.5 nTPM
GTEx:26.2 nTPM
FANTOM5:21.1 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:17.3 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037893Antibody HPA037894
Glial cells LowNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.5
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
1855 Male, age 76, left hemisphere 33.4
1898 Male, age 80, left hemisphere 32.4
2621 Female, age 67, right hemisphere 32.1
2148 Female, age 91, left hemisphere 31.7
2529 Female, age 94, left hemisphere 31.4
1911 Female, age 85, right hemisphere 28.1
Dentate gyrus
nTPM: 31.1
2010 Male, age 76, both hemispheres 34.5
2530 Female, age 94, left hemisphere 34.0
2531 Female, age 67, both hemispheres 30.4
2528 Male, age 74, both hemispheres 30.3
2246 Female, age 85, both hemispheres 29.8
1927 Female, age 91, both hemispheres 27.6
Entorhinal gyrus
nTPM: 30.8
1787 Male, age 76, left hemisphere 32.1
2117 Female, age 91, right hemisphere 32.0
2764 Male, age 80, right hemisphere 30.5
2686 Male, age 75, right hemisphere 30.4
1938 Female, age 85, left hemisphere 30.0
2613 Female, age 94, left hemisphere 29.9
Hippocampus, CA1
nTPM: 31.0
2045 Male, age 76, both hemispheres 33.4
2527 Male, age 74, both hemispheres 32.3
2082 Female, age 91, right hemisphere 30.4
2749 Male, age 80, left hemisphere 30.1
1873 Female, age 85, both hemispheres 29.0
Hippocampus, CA2
nTPM: 31.1
2437 Female, age 94, left hemisphere 34.9
1963 Male, age 80, left hemisphere 31.0
2113 Female, age 91, right hemisphere 30.7
1892 Male, age 76, both hemispheres 30.5
2249 Male, age 74, both hemispheres 29.7
1940 Female, age 85, left hemisphere 29.5
Hippocampus, CA3
nTPM: 30.8
2861 Female, age 67, both hemispheres 33.6
1867 Male, age 76, both hemispheres 33.4
2436 Male, age 74, both hemispheres 31.0
2620 Female, age 94, left hemisphere 30.2
2137 Male, age 80, left hemisphere 29.3
1891 Female, age 85, both hemispheres 27.5
Parahippocampal cortex
nTPM: 30.6
2018 Male, age 76, both hemispheres 35.4
2622 Female, age 67, right hemisphere 32.7
2245 Female, age 91, both hemispheres 31.2
2532 Female, age 72, left hemisphere 30.7
2692 Male, age 74, both hemispheres 30.6
1990 Female, age 91, right hemisphere 29.9
1850 Male, age 80, both hemispheres 29.6
2250 Female, age 67, right hemisphere 29.0
1933 Female, age 85, both hemispheres 28.6
2693 Female, age 94, both hemispheres 28.4
Perirhinal gyrus
nTPM: 29.8
2521 Female, age 94, right hemisphere 30.1
1794 Male, age 80, right hemisphere 30.0
1847 Female, age 91, left hemisphere 29.9
2848 Male, age 76, right hemisphere 29.9
1841 Female, age 85, right hemisphere 29.0
Subiculum
nTPM: 31.1
2438 Female, age 94, left hemisphere 33.1
2042 Male, age 76, both hemispheres 32.9
2619 Male, age 74, both hemispheres 32.0
2729 Female, age 91, right hemisphere 30.7
1901 Male, age 80, both hemispheres 29.4
1977 Female, age 85, both hemispheres 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 77.6
Min nTPM: 18.1
Std nTPM: 5.8
Median nTPM: 25.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 77.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 47.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 43.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 38.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 37.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 36.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 36.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 35.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 35.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 34.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 34.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.1
FF:10153-102I9 76 years, female 25.6
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 14.7
Sample A Female 23.1
Sample B Female 16.9
Sample C Male 17.1
Sample D Male 14.7
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 15.9
Min nTPM: 14.8
Sample A Female 15.9
Sample B Female 15.1
Sample C Male 14.8
Sample D Male 15.1
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 20.2
Min nTPM: 11.0
Sample A Female 20.2
Sample B Female 13.2
Sample C Male 14.9
Sample D Male 11.0
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 12.4
Sample A Female 17.1
Sample B Female 12.4
Sample C Male 23.5
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 17.2
Min nTPM: 15.9
Sample A Male 16.4
Sample B Male 17.2
Sample C Female 15.9
Sample D Female 16.4
Hippocampal formation
nTPM: 17.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 16.0
Sample A Male 16.0
Sample B Male 16.6
Sample C Female 17.5
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
68443063 Antisense, RP_050111_01_C09, Mouse strain C57BL/6J (56 days, male) 8.3

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