HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:308.9 nTPM
HPA:308.9 nTPM
GTEx:487.6 nTPM
FANTOM5:631.8 Scaled Tags Per Million
Pig:300.7 nTPM
Mouse:507.6 nTPM
Allen mouse:27.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071191Antibody HPA074390
Glial cells MediumNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 308.9
Sample id Sample description nTPM
Hippocampus
nTPM: 252.3
2621 Female, age 67, right hemisphere 356.4
2148 Female, age 91, left hemisphere 256.5
1855 Male, age 76, left hemisphere 254.2
1898 Male, age 80, left hemisphere 231.7
1911 Female, age 85, right hemisphere 212.3
2529 Female, age 94, left hemisphere 202.6
Dentate gyrus
nTPM: 243.7
2531 Female, age 67, both hemispheres 438.3
1927 Female, age 91, both hemispheres 260.7
2010 Male, age 76, both hemispheres 250.9
2530 Female, age 94, left hemisphere 179.8
2528 Male, age 74, both hemispheres 175.5
2246 Female, age 85, both hemispheres 156.8
Entorhinal gyrus
nTPM: 85.5
2613 Female, age 94, left hemisphere 146.1
2686 Male, age 75, right hemisphere 88.2
2117 Female, age 91, right hemisphere 80.0
1938 Female, age 85, left hemisphere 70.3
1787 Male, age 76, left hemisphere 64.5
2764 Male, age 80, right hemisphere 63.7
Hippocampus, CA1
nTPM: 274.6
2749 Male, age 80, left hemisphere 381.6
2045 Male, age 76, both hemispheres 311.9
2527 Male, age 74, both hemispheres 309.4
1873 Female, age 85, both hemispheres 190.8
2082 Female, age 91, right hemisphere 179.4
Hippocampus, CA2
nTPM: 200.9
1963 Male, age 80, left hemisphere 348.4
1892 Male, age 76, both hemispheres 227.7
2113 Female, age 91, right hemisphere 223.0
2249 Male, age 74, both hemispheres 143.9
1940 Female, age 85, left hemisphere 142.3
2437 Female, age 94, left hemisphere 119.9
Hippocampus, CA3
nTPM: 308.9
2620 Female, age 94, left hemisphere 458.9
2861 Female, age 67, both hemispheres 435.8
2137 Male, age 80, left hemisphere 434.2
1867 Male, age 76, both hemispheres 243.4
2436 Male, age 74, both hemispheres 159.1
1891 Female, age 85, both hemispheres 122.2
Parahippocampal cortex
nTPM: 125.0
2245 Female, age 91, both hemispheres 280.1
2693 Female, age 94, both hemispheres 173.4
2622 Female, age 67, right hemisphere 170.1
2018 Male, age 76, both hemispheres 139.3
2250 Female, age 67, right hemisphere 114.8
1850 Male, age 80, both hemispheres 101.4
1933 Female, age 85, both hemispheres 80.2
1990 Female, age 91, right hemisphere 76.7
2532 Female, age 72, left hemisphere 64.1
2692 Male, age 74, both hemispheres 49.8
Perirhinal gyrus
nTPM: 144.8
2521 Female, age 94, right hemisphere 273.0
1794 Male, age 80, right hemisphere 157.9
1841 Female, age 85, right hemisphere 125.2
1847 Female, age 91, left hemisphere 116.9
2848 Male, age 76, right hemisphere 51.1
Subiculum
nTPM: 108.1
2729 Female, age 91, right hemisphere 176.3
1901 Male, age 80, both hemispheres 152.8
2042 Male, age 76, both hemispheres 123.7
1977 Female, age 85, both hemispheres 82.9
2619 Male, age 74, both hemispheres 66.3
2438 Female, age 94, left hemisphere 46.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 487.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 487.6
Samples: 197

Max nTPM: 1483.8
Min nTPM: 10.3
Std nTPM: 332.5
Median nTPM: 449.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1483.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1476.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1458.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1383.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1359.2
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1344.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1283.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1278.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1230.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 1169.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1167.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 631.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 631.8
FF:10169-103B7 60 years, female 890.4
FF:10153-102I9 76 years, female 373.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 300.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 290.6
Samples: 4

Max nTPM: 376.3
Min nTPM: 125.0
Sample A Female 336.5
Sample B Female 376.3
Sample C Male 125.0
Sample D Male 324.4
Entorhinal cortex
nTPM: 277.3
Samples: 4

Max nTPM: 299.8
Min nTPM: 246.0
Sample A Female 299.8
Sample B Female 292.6
Sample C Male 270.8
Sample D Male 246.0
Subiculum
nTPM: 166.5
Samples: 4

Max nTPM: 215.3
Min nTPM: 129.8
Sample A Female 215.3
Sample B Female 147.9
Sample C Male 129.8
Sample D Male 173.1
Ventral hippocampus
nTPM: 300.7
Samples: 4

Max nTPM: 435.3
Min nTPM: 162.3
Sample A Female 435.3
Sample B Female 237.8
Sample C Male 367.5
Sample D Male 162.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 507.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 361.2
Samples: 4

Max nTPM: 376.2
Min nTPM: 337.0
Sample A Male 376.2
Sample B Male 337.0
Sample C Female 367.4
Sample D Female 364.2
Hippocampal formation
nTPM: 507.6
Samples: 4

Max nTPM: 562.5
Min nTPM: 451.7
Sample A Male 470.2
Sample B Male 545.9
Sample C Female 562.5
Sample D Female 451.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.7
308054482 Antisense, RP_110407_01_B06, Mouse strain C57BL/6J (56 days, male) 27.7

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The Human Protein Atlas

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