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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:194.3 nTPM
HPA:194.3 nTPM
GTEx:152.3 nTPM
FANTOM5:296.0 Scaled Tags Per Million
Pig:139.7 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 194.3
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 174.6
2048 Male, age 55, midline 197.9
1981 Female, age 72, midline 177.0
2816 Male, age 47, midline 169.2
2194 Female, age 79, both hemispheres 167.3
2565 Male, age 75, midline 161.8
Cervical spinal cord, dorsal horn
nTPM: 161.2
2173 Female, age 72, unknown 193.7
2296 Male, age 66, both hemispheres 188.7
1877 Male, age 55, unknown 169.6
2069 Male, age 47, both hemispheres 150.7
2721 Male, age 90, both hemispheres 142.8
2297 Male, age 75, both hemispheres 121.5
Cervical spinal cord, ventral horn
nTPM: 194.3
2809 Male, age 90, both hemispheres 228.0
2295 Male, age 66, both hemispheres 209.6
2480 Male, age 75, both hemispheres 201.4
2098 Female, age 72, unknown 183.7
2068 Male, age 55, unknown 178.2
2820 Female, age 79, both hemispheres 164.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 152.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 152.3
Samples: 159

Max nTPM: 349.8
Min nTPM: 40.3
Std nTPM: 51.7
Median nTPM: 152.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 349.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 298.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 289.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 272.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 254.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 254.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 249.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 242.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 241.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 241.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 240.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 234.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 230.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 227.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 226.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 224.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 220.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 215.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 213.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 212.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 203.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 203.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 202.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 202.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 195.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 192.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 190.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 188.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 187.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 187.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 186.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 185.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 184.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 184.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 183.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 182.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 181.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 181.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 179.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 178.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 178.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 176.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 176.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 175.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 175.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 174.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 174.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 174.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 172.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 172.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 169.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 169.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 168.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 168.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 167.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 167.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 167.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 166.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 164.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 162.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 162.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 161.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 161.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 160.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 160.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 158.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 158.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 157.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 156.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 156.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 156.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 156.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 155.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 155.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 155.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 154.9
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 154.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 153.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 153.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 152.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 150.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 149.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 149.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 147.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 147.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 146.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 145.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 144.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 144.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 144.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 143.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 143.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 142.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 141.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 140.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 140.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 139.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 138.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 136.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 136.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 136.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 136.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 135.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 134.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 133.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 132.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 132.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 131.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 131.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 129.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 129.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 128.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 127.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 127.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 125.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 125.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 125.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 125.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 122.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 119.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 119.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 118.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 114.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 114.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 113.2
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 113.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 112.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 111.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 107.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 107.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 107.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 106.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 106.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 106.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 104.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 102.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 100.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 97.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 96.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 94.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 92.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 86.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 85.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 82.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 79.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 77.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 76.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 75.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 75.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 72.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 71.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 71.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 69.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 67.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 61.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 48.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 42.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 41.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 40.3
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 296.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 296.0
FF:10181-103D1 60 years, female 346.4
FF:10159-103A6 76 years, female 245.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 122.4
Samples: 4

Max nTPM: 136.9
Min nTPM: 86.1
Sample A Female 132.7
Sample B Female 133.9
Sample C Male 86.1
Sample D Male 136.9
Ventral spinal cord
nTPM: 139.7
Samples: 4

Max nTPM: 155.6
Min nTPM: 116.7
Sample A Female 147.0
Sample B Female 139.5
Sample C Male 116.7
Sample D Male 155.6

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