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RPL7
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1420.5 nTPM
HPA:1262.6 nTPM
GTEx:1420.5 nTPM
FANTOM5:2.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA058373
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1262.6
overview
Male, age 65
Small intestine sample 232
nTPM: 1645
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1185.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1030
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1189.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1420.5
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1420.5
Samples: 187

Max nTPM: 3049.9
Min nTPM: 754.6
Std nTPM: 387.9
Median nTPM: 1373.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3049.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2973.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2812.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2689.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2428.3
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2384.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2268.2
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2216.3
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2127.7
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2115.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 2048.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2044.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2035.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2009.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1992.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1986.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 1986.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1980.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1935.9
GTEX-1192X-2526-SM-59868 50-59 years, male 1928.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1913.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1899.6
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1816.8
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1805.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1779.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1763.1
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1717.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1712.1
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1711.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1704.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1704.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1688.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1685.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1666.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1663.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1650.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1647.3
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1632.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1631.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1604.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1602.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1592.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1590.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1583.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1581.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1579.0
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1565.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1558.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1554.1
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1553.0
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1552.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1550.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1537.0
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1536.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1536.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1532.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1532.1
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1525.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1523.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1522.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1519.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1515.8
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1510.4
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1508.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1500.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1487.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1481.2
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1478.0
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1472.6
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1471.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1462.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1456.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1452.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1451.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1450.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1446.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 1446.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1443.8
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1435.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1434.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1433.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1433.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1432.2
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1413.8
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1413.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1403.2
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1396.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1388.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1385.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1380.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1376.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1374.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1373.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1373.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1369.0
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1359.8
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1356.2
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1345.6
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1343.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1338.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1338.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1328.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1327.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1326.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1320.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1316.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1315.9
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1305.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1303.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1302.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1302.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1302.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1302.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1301.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1298.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1298.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1292.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1290.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1285.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1270.1
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1269.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1268.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1236.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1236.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1235.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1231.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1230.0
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1223.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1222.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1213.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1213.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1210.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1204.9
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1203.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1201.5
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1182.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1169.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1165.4
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1156.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1154.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1149.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1146.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1134.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1132.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1131.9
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1130.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1130.3
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1129.8
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1122.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1116.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1112.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1107.0
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1094.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1093.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1093.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1089.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1080.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1077.2
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1073.1
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1069.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1054.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 1054.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1042.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1041.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1039.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1033.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1014.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1008.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1006.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1002.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 999.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 968.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 966.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 952.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 952.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 937.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 933.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 930.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 909.2
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 895.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 865.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 843.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 817.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 810.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 790.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 789.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 754.6
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 2.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 2.5
FF:10024-101D6 15,40,85 years, mixed 2.5

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