HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:193.3 nTPM
HPA:193.3 nTPM
GTEx:175.6 nTPM
FANTOM5:123.3 Scaled Tags Per Million
Mouse:190.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042492Antibody HPA044839
Glial cells MediumHigh
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 193.3
Sample id Sample description nTPM
Hippocampus
nTPM: 187.2
2529 Female, age 94, left hemisphere 205.1
1898 Male, age 80, left hemisphere 195.5
1911 Female, age 85, right hemisphere 192.4
2148 Female, age 91, left hemisphere 182.1
1855 Male, age 76, left hemisphere 177.9
2621 Female, age 67, right hemisphere 170.0
Dentate gyrus
nTPM: 168.3
2528 Male, age 74, both hemispheres 188.8
2246 Female, age 85, both hemispheres 184.5
2010 Male, age 76, both hemispheres 171.7
1927 Female, age 91, both hemispheres 167.5
2530 Female, age 94, left hemisphere 155.0
2531 Female, age 67, both hemispheres 142.3
Entorhinal gyrus
nTPM: 193.3
2117 Female, age 91, right hemisphere 228.1
1938 Female, age 85, left hemisphere 217.0
1787 Male, age 76, left hemisphere 195.8
2764 Male, age 80, right hemisphere 184.0
2686 Male, age 75, right hemisphere 170.3
2613 Female, age 94, left hemisphere 164.4
Hippocampus, CA1
nTPM: 189.3
2527 Male, age 74, both hemispheres 230.1
1873 Female, age 85, both hemispheres 194.6
2749 Male, age 80, left hemisphere 178.6
2082 Female, age 91, right hemisphere 177.2
2045 Male, age 76, both hemispheres 166.3
Hippocampus, CA2
nTPM: 178.1
2249 Male, age 74, both hemispheres 194.9
2113 Female, age 91, right hemisphere 194.1
1940 Female, age 85, left hemisphere 179.4
1963 Male, age 80, left hemisphere 175.1
1892 Male, age 76, both hemispheres 163.1
2437 Female, age 94, left hemisphere 162.0
Hippocampus, CA3
nTPM: 174.3
1891 Female, age 85, both hemispheres 199.8
2436 Male, age 74, both hemispheres 189.7
1867 Male, age 76, both hemispheres 173.6
2137 Male, age 80, left hemisphere 171.0
2861 Female, age 67, both hemispheres 158.2
2620 Female, age 94, left hemisphere 153.7
Parahippocampal cortex
nTPM: 193.3
2250 Female, age 67, right hemisphere 220.4
1933 Female, age 85, both hemispheres 215.1
2692 Male, age 74, both hemispheres 209.6
2622 Female, age 67, right hemisphere 209.0
1990 Female, age 91, right hemisphere 196.1
1850 Male, age 80, both hemispheres 194.2
2018 Male, age 76, both hemispheres 177.8
2245 Female, age 91, both hemispheres 177.5
2693 Female, age 94, both hemispheres 176.3
2532 Female, age 72, left hemisphere 157.3
Perirhinal gyrus
nTPM: 187.7
1847 Female, age 91, left hemisphere 208.3
1794 Male, age 80, right hemisphere 194.0
1841 Female, age 85, right hemisphere 187.5
2521 Female, age 94, right hemisphere 177.9
2848 Male, age 76, right hemisphere 171.1
Subiculum
nTPM: 190.4
2619 Male, age 74, both hemispheres 219.6
2729 Female, age 91, right hemisphere 209.6
1977 Female, age 85, both hemispheres 197.7
1901 Male, age 80, both hemispheres 175.2
2438 Female, age 94, left hemisphere 170.4
2042 Male, age 76, both hemispheres 170.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 175.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 175.6
Samples: 197

Max nTPM: 412.1
Min nTPM: 69.3
Std nTPM: 69.1
Median nTPM: 158.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 412.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 398.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 379.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 370.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 360.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 359.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 350.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 344.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 340.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 336.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 320.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.3
FF:10153-102I9 76 years, female 178.6
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 190.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 190.6
Samples: 4

Max nTPM: 201.3
Min nTPM: 176.5
Sample A Male 201.3
Sample B Male 184.3
Sample C Female 200.2
Sample D Female 176.5
Hippocampal formation
nTPM: 176.3
Samples: 4

Max nTPM: 209.5
Min nTPM: 154.8
Sample A Male 209.5
Sample B Male 165.3
Sample C Female 154.8
Sample D Female 175.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
504 Antisense, RP_Baylor_102820, Mouse strain C57BL/6J (56 days, male) 0.1
503 Antisense, RP_Baylor_102820, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.