PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:107.3 nTPM
HPA:107.3 nTPM
FANTOM5:314.7 Scaled Tags Per Million
Pig:122.9 nTPM
Mouse:62.1 nTPM
Allen mouse:1.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 107.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 79.8
1984 Male, age 76, both hemispheres 80.5
2301 Female, age 85, both hemispheres 80.2
2090 Male, age 80, both hemispheres 80.0
2188 Female, age 91, both hemispheres 78.5
Area postrema
nTPM: 107.3
2799 Male, age 61, both hemispheres 124.7
2306 Male, age 80, both hemispheres 107.8
2054 Male, age 76, both hemispheres 89.3
Cuneate nuclei
nTPM: 75.8
2381 Male, age 80, both hemispheres 78.0
2376 Male, age 61, both hemispheres 74.9
2131 Male, age 76, both hemispheres 74.5
Dorsal cochlear nucleus
nTPM: 85.3
2378 Male, age 80, both hemispheres 94.5
2802 Male, age 74, right hemisphere 93.2
2058 Male, age 76, both hemispheres 88.2
2370 Male, age 61, both hemispheres 78.7
2187 Female, age 91, both hemispheres 72.0
Dorsal medullary reticular nucleus
nTPM: 81.9
2373 Male, age 61, both hemispheres 85.5
2040 Female, age 85, both hemispheres 82.5
2088 Male, age 76, both hemispheres 77.9
Dorsal motor vagal complex
nTPM: 92.5
2797 Male, age 61, both hemispheres 106.9
2813 Female, age 72, unknown 102.4
2643 Male, age 74, both hemispheres 94.8
2000 Male, age 74, unknown 94.0
2185 Male, age 76, both hemispheres 93.5
2844 Male, age 55, unknown 89.1
2807 Female, age 85, both hemispheres 80.9
2133 Female, age 91, both hemispheres 78.4
Dorsal tegmental nucleus
nTPM: 80.0
1936 Male, age 76, left hemisphere 86.2
2326 Male, age 74, both hemispheres 84.8
2083 Male, age 80, both hemispheres 77.7
2358 Male, age 61, both hemispheres 71.3
Dorsolateral tegmental area
nTPM: 78.2
2654 Male, age 80, both hemispheres 83.9
2360 Male, age 74, both hemispheres 80.3
2751 Female, age 85, both hemispheres 78.5
2337 Male, age 61, both hemispheres 75.7
2141 Male, age 76, both hemispheres 72.7
Gigantocellular reticular nuclei, medullary
nTPM: 82.2
2314 Male, age 61, both hemispheres 93.1
2022 Male, age 76, right hemisphere 84.2
1876 Female, age 85, both hemispheres 83.7
2387 Female, age 91, both hemispheres 83.4
2462 Male, age 74, both hemispheres 78.9
2310 Male, age 80, both hemispheres 69.7
Gigantocellular reticular nuclei, pars
nTPM: 75.9
2084 Female, age 85, both hemispheres 80.5
2706 Male, age 80, both hemispheres 76.8
2330 Male, age 80, both hemispheres 75.3
2168 Male, age 76, both hemispheres 74.3
2336 Male, age 61, both hemispheres 72.3
Inferior olive
nTPM: 102.1
2085 Female, age 85, both hemispheres 110.1
2379 Male, age 80, both hemispheres 107.5
2563 Male, age 74, both hemispheres 106.9
2178 Male, age 61, both hemispheres 101.1
2628 Female, age 91, both hemispheres 84.8
Kolliker-Fuse nucleus
nTPM: 88.9
2315 Male, age 76, right hemisphere 118.8
2163 Male, age 80, both hemispheres 75.3
2793 Female, age 91, left hemisphere 72.6
Lateral lemniscal nuclei
nTPM: 70.8
2169 Male, age 76, both hemispheres 76.9
2320 Female, age 91, left hemisphere 70.6
2746 Female, age 85, left hemisphere 70.6
2036 Male, age 80, both hemispheres 68.5
2453 Male, age 74, right hemisphere 67.3
Lateral medullary reticular nucleus
nTPM: 92.4
2374 Male, age 61, both hemispheres 97.8
2804 Female, age 91, both hemispheres 96.8
2190 Female, age 85, both hemispheres 94.9
2305 Male, age 74, both hemispheres 89.2
2852 Male, age 80, both hemispheres 89.0
2044 Male, age 76, both hemispheres 86.8
Lateral parabrachial nucleus
nTPM: 87.6
2792 Male, age 76, both hemispheres 101.4
2139 Female, age 85, right hemisphere 87.6
2013 Male, age 80, both hemispheres 85.3
2790 Male, age 61, both hemispheres 75.9
Lateral vestibular nucleus
nTPM: 80.6
2311 Male, age 80, both hemispheres 83.4
2184 Male, age 76, both hemispheres 77.8
Locus coeruleus
nTPM: 75.5
2788 Male, age 74, unknown 86.6
2317 Female, age 72, unknown 78.6
2720 Male, age 74, both hemispheres 74.9
2014 Male, age 55, unknown 74.0
2162 Male, age 80, both hemispheres 73.9
1980 Male, age 76, both hemispheres 72.1
2123 Female, age 91, both hemispheres 68.4
Medial olivary nucleus
nTPM: 102.0
2138 Female, age 91, both hemispheres 112.2
1943 Male, age 61, both hemispheres 110.0
1962 Male, age 76, both hemispheres 93.8
2851 Male, age 80, both hemispheres 92.1
Medial parabrachial nucleus
nTPM: 74.0
2786 Male, age 76, both hemispheres 77.3
2156 Male, age 61, both hemispheres 75.7
2463 Female, age 85, right hemisphere 74.7
2854 Male, age 80, both hemispheres 74.5
2170 Female, age 91, both hemispheres 68.0
Medial periolivary nuclei
nTPM: 77.5
2791 Male, age 74, right hemisphere 91.8
2063 Male, age 76, both hemispheres 84.2
2171 Female, age 85, both hemispheres 71.3
2081 Male, age 80, both hemispheres 70.6
2458 Female, age 91, both hemispheres 69.5
Medial vestibular nucleus
nTPM: 80.1
2743 Female, age 85, both hemispheres 83.2
2803 Female, age 91, both hemispheres 82.2
2134 Male, age 76, both hemispheres 82.0
2093 Male, age 80, both hemispheres 80.5
2801 Male, age 74, both hemispheres 78.9
2624 Male, age 61, both hemispheres 73.7
Motor facial nucleus
nTPM: 77.2
2795 Female, age 91, both hemispheres 83.8
2062 Male, age 76, both hemispheres 81.5
2365 Male, age 74, right hemisphere 80.5
2697 Female, age 85, both hemispheres 75.2
2126 Male, age 61, both hemispheres 72.5
2327 Male, age 80, both hemispheres 69.5
Motor hypoglossal nucleus
nTPM: 78.5
2461 Male, age 61, both hemispheres 84.5
2125 Female, age 91, both hemispheres 81.8
2277 Male, age 76, both hemispheres 79.5
2132 Female, age 85, both hemispheres 75.4
2182 Male, age 80, both hemispheres 71.4
Motor trigeminal nucleus
nTPM: 69.7
2309 Male, age 76, both hemispheres 81.5
2335 Male, age 61, both hemispheres 69.0
2079 Male, age 80, both hemispheres 68.4
2321 Female, age 91, both hemispheres 64.9
2560 Male, age 74, both hemispheres 64.8
Nuclei of the trapezoid body
nTPM: 75.7
1983 Male, age 76, both hemispheres 84.5
2368 Female, age 91, both hemispheres 77.6
2166 Male, age 80, both hemispheres 73.9
2159 Male, age 61, both hemispheres 71.9
2735 Female, age 85, both hemispheres 70.5
Nucleus ambiguus
nTPM: 82.5
2071 Male, age 76, both hemispheres 104.2
2096 Female, age 85, both hemispheres 60.8
Nucleus cuneatus
nTPM: 86.7
2380 Male, age 80, both hemispheres 99.4
2808 Female, age 85, both hemispheres 90.9
2564 Male, age 74, both hemispheres 86.4
2805 Female, age 91, both hemispheres 85.4
2562 Male, age 61, both hemispheres 80.2
2100 Male, age 76, both hemispheres 77.8
Nucleus gracilis
nTPM: 92.1
2627 Male, age 74, both hemispheres 99.1
2299 Female, age 85, both hemispheres 90.6
2382 Male, age 80, both hemispheres 86.8
Nucleus raphe magnus
nTPM: 72.6
2455 Male, age 74, both hemispheres 80.0
2051 Male, age 76, both hemispheres 79.6
2328 Male, age 80, both hemispheres 75.2
2459 Female, age 91, both hemispheres 69.4
2160 Male, age 61, both hemispheres 66.7
2172 Female, age 85, both hemispheres 64.7
Nucleus raphe obscurus
nTPM: 89.4
2142 Male, age 76, midline 103.1
2845 Female, age 85, midline 84.4
2800 Male, age 61, midline 80.6
Nucleus raphe pallidus
nTPM: 91.9
1924 Male, age 61, midline 108.3
2145 Male, age 76, midline 91.0
2183 Male, age 80, midline 76.5
Nucleus tractus solitarii
nTPM: 89.6
2144 Female, age 91, right hemisphere 123.7
2191 Female, age 85, both hemispheres 84.7
2656 Male, age 76, both hemispheres 77.1
2307 Male, age 80, both hemispheres 73.0
Paramedian reticular nucleus
nTPM: 79.5
2052 Male, age 76, both hemispheres 92.2
2057 Male, age 80, both hemispheres 80.5
2050 Female, age 85, both hemispheres 73.1
2313 Male, age 61, both hemispheres 72.3
Parvicellular reticular nuclei
nTPM: 75.3
2095 Male, age 76, both hemispheres 84.0
2119 Male, age 80, both hemispheres 79.7
2558 Male, age 74, both hemispheres 62.2
Parvicellular reticular nuclei, medullary
nTPM: 78.5
2181 Male, age 80, left hemisphere 81.5
2091 Female, age 85, both hemispheres 77.4
2189 Female, age 91, both hemispheres 76.5
Peritrigeminal nucleus
nTPM: 88.7
2136 Male, age 76, both hemispheres 93.1
2067 Female, age 85, both hemispheres 91.9
2179 Male, age 61, both hemispheres 81.0
Pontine nuclei
nTPM: 69.3
1968 Male, age 76, left hemisphere 75.3
1863 Male, age 55, unknown 73.9
2319 Female, age 91, both hemispheres 73.7
2109 Female, age 72, unknown 70.8
2115 Male, age 80, left hemisphere 69.6
2454 Male, age 74, left hemisphere 66.2
2727 Male, age 61, right hemisphere 63.4
2787 Female, age 85, both hemispheres 61.6
Pontine raphe nucleus
nTPM: 73.4
2853 Male, age 76, midline 76.9
2122 Female, age 85, midline 69.9
Posteroventral cochlear nucleus
nTPM: 81.8
2341 Male, age 80, both hemispheres 85.2
2371 Male, age 61, both hemispheres 82.5
2135 Female, age 91, both hemispheres 82.2
2070 Male, age 76, both hemispheres 81.0
2752 Female, age 85, both hemispheres 78.1
Prepositus hypoglossal nucleus
nTPM: 88.3
2086 Male, age 80, both hemispheres 91.5
2855 Female, age 85, right hemisphere 85.0
Principal sensory trigeminal nucleus
nTPM: 71.9
2324 Male, age 76, both hemispheres 81.7
2367 Female, age 91, left hemisphere 69.1
2008 Male, age 80, left hemisphere 68.8
2158 Male, age 61, both hemispheres 68.1
Reticular pontine nucleus, caudal
nTPM: 73.9
2092 Male, age 76, both hemispheres 84.7
2457 Female, age 91, both hemispheres 74.2
2559 Male, age 74, both hemispheres 70.4
2332 Male, age 80, right hemisphere 66.3
Reticular pontine nucleus, oral
nTPM: 73.7
1939 Male, age 80, both hemispheres 80.3
2167 Male, age 76, both hemispheres 77.1
2366 Female, age 91, both hemispheres 76.8
2012 Female, age 85, both hemispheres 73.8
2361 Male, age 74, both hemispheres 60.5
Reticulotegmental nucleus
nTPM: 73.8
2325 Male, age 76, both hemispheres 75.0
2333 Male, age 80, both hemispheres 75.0
2322 Female, age 91, both hemispheres 74.0
2452 Male, age 74, both hemispheres 71.2
Spinal trigeminal nucleus, caudal
nTPM: 80.8
2308 Male, age 80, both hemispheres 85.9
2642 Male, age 74, both hemispheres 83.6
2312 Male, age 61, both hemispheres 78.8
2447 Male, age 76, both hemispheres 78.0
2390 Female, age 91, both hemispheres 77.6
Spinal trigeminal nucleus, interpolar
nTPM: 80.0
2066 Male, age 76, right hemisphere 84.7
2386 Female, age 85, both hemispheres 82.3
2033 Male, age 80, both hemispheres 80.5
2389 Female, age 91, both hemispheres 76.8
2625 Male, age 61, both hemispheres 75.9
Spinal trigeminal nucleus, oral
nTPM: 77.5
1978 Male, age 76, both hemispheres 83.7
2737 Female, age 85, both hemispheres 75.0
2164 Male, age 80, both hemispheres 73.8
Spinal vestibular nucleus
nTPM: 82.4
2806 Female, age 85, both hemispheres 89.7
2384 Male, age 74, both hemispheres 85.1
2748 Male, age 76, both hemispheres 84.1
2186 Female, age 91, both hemispheres 81.1
2780 Male, age 80, both hemispheres 79.5
2796 Male, age 61, both hemispheres 75.0
Subcoeruleus area
nTPM: 76.8
2369 Female, age 85, left hemisphere 82.4
2451 Male, age 74, both hemispheres 79.9
1958 Male, age 80, both hemispheres 77.8
2089 Male, age 76, left hemisphere 72.6
2323 Female, age 91, left hemisphere 71.1
Superior olive
nTPM: 77.1
2364 Male, age 74, right hemisphere 87.8
2020 Male, age 76, both hemispheres 85.0
1875 Female, age 85, both hemispheres 72.0
2329 Male, age 80, right hemisphere 70.8
2561 Female, age 91, both hemispheres 69.7
Superior vestibular nucleus
nTPM: 92.0
2383 Male, age 74, both hemispheres 100.4
2015 Male, age 80, both hemispheres 89.2
2061 Male, age 76, both hemispheres 86.4
Ventral medullary reticular nucleus
nTPM: 87.3
2372 Male, age 61, both hemispheres 98.4
2060 Male, age 76, both hemispheres 76.2
Ventral periolivary nuclei
nTPM: 77.2
2023 Male, age 76, both hemispheres 87.5
2165 Male, age 80, both hemispheres 77.4
2130 Female, age 85, both hemispheres 76.6
2794 Female, age 91, left hemisphere 67.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 87.2
2302 Female, age 91, both hemispheres 92.1
1986 Male, age 76, both hemispheres 89.4
2180 Male, age 61, both hemispheres 86.0
2118 Male, age 80, both hemispheres 84.9
2741 Female, age 85, both hemispheres 83.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 77.5
1959 Male, age 76, both hemispheres 84.1
2359 Male, age 61, both hemispheres 82.9
2161 Male, age 80, both hemispheres 76.0
2840 Female, age 85, both hemispheres 75.7
2456 Female, age 91, both hemispheres 74.0
2449 Male, age 74, both hemispheres 72.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 314.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 311.8
FF:10182-103D2 60 years, female 406.5
FF:10165-103B3 76 years, female 217.2
Medulla oblongata
Scaled Tags Per Million: 314.7
FF:10174-103C3 60 years, female 394.9
FF:10155-103A2 76 years, female 284.8
FF:10038-101F2 18-64 years, mixed 264.3
Pons
Scaled Tags Per Million: 233.8
FF:10033-101E6 18-54 years, mixed 233.8

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 122.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 122.9
Samples: 4

Max nTPM: 150.9
Min nTPM: 89.0
Sample A Female 138.3
Sample B Female 89.0
Sample C Male 113.3
Sample D Male 150.9
Pons
nTPM: 94.8
Samples: 4

Max nTPM: 118.1
Min nTPM: 64.6
Sample A Female 109.2
Sample B Female 64.6
Sample C Male 87.2
Sample D Male 118.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 62.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 62.1
Samples: 4

Max nTPM: 63.8
Min nTPM: 60.7
Sample A Male 63.8
Sample B Male 62.7
Sample C Female 61.3
Sample D Female 60.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.5
68795422 Antisense, RP_041122_02_E04, Mouse strain C57BL/6J (56 days, male) 1.5
Pons
Expression energy: 1.5
68795422 Antisense, RP_041122_02_E04, Mouse strain C57BL/6J (56 days, male) 1.5

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