HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.0 nTPM
HPA:52.0 nTPM
GTEx:48.1 nTPM
FANTOM5:86.1 Scaled Tags Per Million
Pig:29.0 nTPM
Mouse:125.2 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031063
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.0
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1898 Male, age 80, left hemisphere 55.4
1855 Male, age 76, left hemisphere 50.0
1911 Female, age 85, right hemisphere 48.7
2529 Female, age 94, left hemisphere 47.6
2621 Female, age 67, right hemisphere 46.3
2148 Female, age 91, left hemisphere 46.2
Dentate gyrus
nTPM: 47.6
2010 Male, age 76, both hemispheres 52.1
1927 Female, age 91, both hemispheres 51.4
2246 Female, age 85, both hemispheres 48.3
2530 Female, age 94, left hemisphere 45.8
2528 Male, age 74, both hemispheres 45.6
2531 Female, age 67, both hemispheres 42.7
Entorhinal gyrus
nTPM: 47.3
1938 Female, age 85, left hemisphere 52.2
2117 Female, age 91, right hemisphere 47.8
1787 Male, age 76, left hemisphere 47.3
2764 Male, age 80, right hemisphere 47.2
2686 Male, age 75, right hemisphere 46.3
2613 Female, age 94, left hemisphere 43.3
Hippocampus, CA1
nTPM: 50.5
1873 Female, age 85, both hemispheres 53.6
2749 Male, age 80, left hemisphere 51.8
2045 Male, age 76, both hemispheres 50.3
2527 Male, age 74, both hemispheres 50.1
2082 Female, age 91, right hemisphere 46.6
Hippocampus, CA2
nTPM: 50.0
1892 Male, age 76, both hemispheres 57.3
1963 Male, age 80, left hemisphere 51.9
2249 Male, age 74, both hemispheres 50.4
2113 Female, age 91, right hemisphere 48.1
1940 Female, age 85, left hemisphere 47.3
2437 Female, age 94, left hemisphere 44.9
Hippocampus, CA3
nTPM: 49.1
2137 Male, age 80, left hemisphere 52.9
1867 Male, age 76, both hemispheres 52.7
1891 Female, age 85, both hemispheres 50.7
2436 Male, age 74, both hemispheres 48.4
2620 Female, age 94, left hemisphere 46.0
2861 Female, age 67, both hemispheres 43.9
Parahippocampal cortex
nTPM: 49.0
1850 Male, age 80, both hemispheres 52.5
1933 Female, age 85, both hemispheres 51.4
2250 Female, age 67, right hemisphere 50.5
2018 Male, age 76, both hemispheres 50.2
1990 Female, age 91, right hemisphere 49.1
2245 Female, age 91, both hemispheres 48.8
2532 Female, age 72, left hemisphere 48.1
2692 Male, age 74, both hemispheres 47.7
2693 Female, age 94, both hemispheres 47.3
2622 Female, age 67, right hemisphere 44.6
Perirhinal gyrus
nTPM: 52.0
1841 Female, age 85, right hemisphere 54.2
1847 Female, age 91, left hemisphere 53.7
1794 Male, age 80, right hemisphere 53.6
2521 Female, age 94, right hemisphere 49.5
2848 Male, age 76, right hemisphere 48.9
Subiculum
nTPM: 48.1
1977 Female, age 85, both hemispheres 50.8
1901 Male, age 80, both hemispheres 50.4
2042 Male, age 76, both hemispheres 49.1
2729 Female, age 91, right hemisphere 47.2
2619 Male, age 74, both hemispheres 46.2
2438 Female, age 94, left hemisphere 45.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.1
Samples: 197

Max nTPM: 118.6
Min nTPM: 27.7
Std nTPM: 11.0
Median nTPM: 47.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 118.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 81.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 80.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 78.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 72.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 71.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 70.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 69.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 69.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 67.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.1
FF:10169-103B7 60 years, female 99.4
FF:10153-102I9 76 years, female 72.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.0
Samples: 4

Max nTPM: 34.1
Min nTPM: 25.9
Sample A Female 34.1
Sample B Female 28.2
Sample C Male 27.7
Sample D Male 25.9
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 18.6
Sample A Female 22.9
Sample B Female 28.3
Sample C Male 24.3
Sample D Male 18.6
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 20.5
Sample A Female 30.0
Sample B Female 21.7
Sample C Male 20.5
Sample D Male 22.0
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 26.5
Min nTPM: 20.7
Sample A Female 25.7
Sample B Female 21.7
Sample C Male 20.7
Sample D Male 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.2
Samples: 4

Max nTPM: 126.6
Min nTPM: 113.0
Sample A Male 113.6
Sample B Male 113.0
Sample C Female 126.6
Sample D Female 115.7
Hippocampal formation
nTPM: 125.3
Samples: 4

Max nTPM: 141.3
Min nTPM: 119.3
Sample A Male 141.3
Sample B Male 119.8
Sample C Female 120.6
Sample D Female 119.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68300974 Antisense, RP_041129_02_E07, Mouse strain C57BL/6J (56 days, male) 4.7

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