HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.5 nTPM
HPA:54.5 nTPM
GTEx:44.0 nTPM
FANTOM5:12.9 Scaled Tags Per Million
Pig:2.5 nTPM
Mouse:7.3 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028910Antibody HPA073279
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.5
Sample id Sample description nTPM
Hippocampus
nTPM: 54.5
2529 Female, age 94, left hemisphere 55.7
2148 Female, age 91, left hemisphere 55.0
1898 Male, age 80, left hemisphere 54.6
1911 Female, age 85, right hemisphere 54.4
1855 Male, age 76, left hemisphere 54.1
2621 Female, age 67, right hemisphere 53.4
Dentate gyrus
nTPM: 53.4
2530 Female, age 94, left hemisphere 57.7
2528 Male, age 74, both hemispheres 55.4
2246 Female, age 85, both hemispheres 52.7
1927 Female, age 91, both hemispheres 52.5
2010 Male, age 76, both hemispheres 51.9
2531 Female, age 67, both hemispheres 50.4
Entorhinal gyrus
nTPM: 54.0
2117 Female, age 91, right hemisphere 58.8
2686 Male, age 75, right hemisphere 55.9
1787 Male, age 76, left hemisphere 53.7
2764 Male, age 80, right hemisphere 53.0
1938 Female, age 85, left hemisphere 51.9
2613 Female, age 94, left hemisphere 51.0
Hippocampus, CA1
nTPM: 53.0
1873 Female, age 85, both hemispheres 54.5
2527 Male, age 74, both hemispheres 53.4
2082 Female, age 91, right hemisphere 52.7
2749 Male, age 80, left hemisphere 52.7
2045 Male, age 76, both hemispheres 51.7
Hippocampus, CA2
nTPM: 53.9
2437 Female, age 94, left hemisphere 56.6
1963 Male, age 80, left hemisphere 55.6
1940 Female, age 85, left hemisphere 53.8
2249 Male, age 74, both hemispheres 53.2
2113 Female, age 91, right hemisphere 53.1
1892 Male, age 76, both hemispheres 51.3
Hippocampus, CA3
nTPM: 52.8
1891 Female, age 85, both hemispheres 54.5
2861 Female, age 67, both hemispheres 53.3
1867 Male, age 76, both hemispheres 52.6
2137 Male, age 80, left hemisphere 52.6
2620 Female, age 94, left hemisphere 52.2
2436 Male, age 74, both hemispheres 51.6
Parahippocampal cortex
nTPM: 52.5
2692 Male, age 74, both hemispheres 55.0
2622 Female, age 67, right hemisphere 54.4
2018 Male, age 76, both hemispheres 54.0
2250 Female, age 67, right hemisphere 52.7
1933 Female, age 85, both hemispheres 52.2
2245 Female, age 91, both hemispheres 52.0
1990 Female, age 91, right hemisphere 51.9
2693 Female, age 94, both hemispheres 51.5
1850 Male, age 80, both hemispheres 50.6
2532 Female, age 72, left hemisphere 50.6
Perirhinal gyrus
nTPM: 50.9
2521 Female, age 94, right hemisphere 51.6
2848 Male, age 76, right hemisphere 51.3
1847 Female, age 91, left hemisphere 51.0
1841 Female, age 85, right hemisphere 50.6
1794 Male, age 80, right hemisphere 49.8
Subiculum
nTPM: 54.5
2042 Male, age 76, both hemispheres 57.5
2729 Female, age 91, right hemisphere 55.7
2619 Male, age 74, both hemispheres 54.7
2438 Female, age 94, left hemisphere 53.4
1901 Male, age 80, both hemispheres 53.1
1977 Female, age 85, both hemispheres 52.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 104.1
Min nTPM: 15.8
Std nTPM: 15.2
Median nTPM: 42.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 104.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 96.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 92.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 88.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 84.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 81.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 76.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 74.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 70.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 70.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 70.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.9
FF:10153-102I9 76 years, female 14.3
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.5
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.9
Sample A Female 2.6
Sample B Female 2.2
Sample C Male 3.2
Sample D Male 1.9
Entorhinal cortex
nTPM: 1.8
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.7
Sample A Female 1.8
Sample B Female 1.9
Sample C Male 1.9
Sample D Male 1.7
Subiculum
nTPM: 1.8
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.6
Sample A Female 1.6
Sample B Female 1.8
Sample C Male 1.8
Sample D Male 2.0
Ventral hippocampus
nTPM: 2.3
Samples: 4

Max nTPM: 2.4
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.3
Sample C Male 2.4
Sample D Male 2.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 11.5
Min nTPM: 4.1
Sample A Male 11.5
Sample B Male 8.0
Sample C Female 5.6
Sample D Female 4.1
Hippocampal formation
nTPM: 5.6
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 5.7
Sample C Female 4.5
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
68443363 Antisense, RP_050111_01_H02, Mouse strain C57BL/6J (56 days, male) 4.2

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