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SAP18
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:145.2 nTPM
FANTOM5:220.1 Scaled Tags Per Million
Pig:24.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA011352Antibody CAB012273
Glial cells HighHigh
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 145.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 145.2
Samples: 246

Max nTPM: 259.4
Min nTPM: 90.7
Std nTPM: 32.8
Median nTPM: 141.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 259.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 254.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 251.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 244.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 233.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 233.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 231.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 225.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 222.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 222.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 220.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 213.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 211.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 210.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 208.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 208.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 207.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 202.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 199.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 197.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 194.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 190.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 189.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 187.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 187.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 186.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 185.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 185.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 182.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 182.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 180.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 179.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 179.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 178.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 177.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 175.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 174.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 174.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 173.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 172.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 171.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 169.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 169.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 168.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 168.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 167.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 165.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 164.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 164.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 164.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 163.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 163.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 162.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 161.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 161.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 161.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 161.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 161.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 161.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 160.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 160.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 159.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 159.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 158.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 158.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 158.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 157.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 157.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 157.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 157.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 157.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 157.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 157.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 157.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 156.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 155.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 155.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 154.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 154.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 153.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 153.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 153.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 152.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 152.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 152.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 152.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 152.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 152.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 152.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 152.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 152.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 151.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 151.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 150.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 150.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 149.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 148.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 147.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 146.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 146.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 146.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 146.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 146.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 145.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 145.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 145.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 145.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 145.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 145.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 144.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 144.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 144.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 144.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 143.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 142.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 142.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 141.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 141.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 141.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 141.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 140.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 140.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 140.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 139.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 139.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 138.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 138.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 137.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 137.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 137.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 137.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 137.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 137.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 136.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 136.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 136.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 135.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 135.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 135.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 134.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 134.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 132.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 132.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 131.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 131.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 130.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 130.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 130.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 130.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 129.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 129.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 128.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 128.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 127.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 127.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 127.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 126.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 125.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 125.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 125.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 125.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 124.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 124.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 124.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 123.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 123.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 123.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 122.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 122.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 122.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 121.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 121.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 121.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 121.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 121.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 121.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 121.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 120.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 120.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 120.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 120.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 119.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 119.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 118.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 117.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 115.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 115.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 115.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 115.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 114.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 114.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 114.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 113.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 113.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 113.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 113.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 113.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 113.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 113.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 112.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 111.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 111.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 111.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 110.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 110.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 109.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 109.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 109.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 108.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 108.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 108.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 107.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 107.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 107.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 107.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 105.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 104.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 104.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 103.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 102.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 101.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 100.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 100.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 99.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 99.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 98.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 98.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 94.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 92.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 92.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 90.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 220.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 220.1
FF:10164-103B2 76 years, female 220.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 24.3
Pig sample Sample description nTPM
Caudate
nTPM: 24.3
Samples: 4

Max nTPM: 28.2
Min nTPM: 21.9
Sample A Female 22.7
Sample B Female 24.4
Sample C Male 28.2
Sample D Male 21.9

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