PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:52.4 nTPM
HPA:52.4 nTPM
FANTOM5:159.0 Scaled Tags Per Million
Pig:29.2 nTPM
Mouse:31.6 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 52.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 44.2
2188 Female, age 91, both hemispheres 50.2
2301 Female, age 85, both hemispheres 48.6
2090 Male, age 80, both hemispheres 43.0
1984 Male, age 76, both hemispheres 34.9
Area postrema
nTPM: 45.9
2799 Male, age 61, both hemispheres 50.1
2054 Male, age 76, both hemispheres 45.2
2306 Male, age 80, both hemispheres 42.3
Cuneate nuclei
nTPM: 41.9
2381 Male, age 80, both hemispheres 44.3
2376 Male, age 61, both hemispheres 42.4
2131 Male, age 76, both hemispheres 39.1
Dorsal cochlear nucleus
nTPM: 43.8
2802 Male, age 74, right hemisphere 47.4
2187 Female, age 91, both hemispheres 44.8
2058 Male, age 76, both hemispheres 44.6
2378 Male, age 80, both hemispheres 42.1
2370 Male, age 61, both hemispheres 39.9
Dorsal medullary reticular nucleus
nTPM: 45.9
2040 Female, age 85, both hemispheres 53.0
2088 Male, age 76, both hemispheres 43.2
2373 Male, age 61, both hemispheres 41.7
Dorsal motor vagal complex
nTPM: 42.5
2000 Male, age 74, unknown 44.3
2133 Female, age 91, both hemispheres 44.3
2797 Male, age 61, both hemispheres 43.1
2813 Female, age 72, unknown 42.4
2185 Male, age 76, both hemispheres 42.2
2807 Female, age 85, both hemispheres 42.0
2844 Male, age 55, unknown 41.6
2643 Male, age 74, both hemispheres 40.0
Dorsal tegmental nucleus
nTPM: 44.4
2326 Male, age 74, both hemispheres 45.3
2358 Male, age 61, both hemispheres 45.2
2083 Male, age 80, both hemispheres 44.4
1936 Male, age 76, left hemisphere 42.8
Dorsolateral tegmental area
nTPM: 44.6
2751 Female, age 85, both hemispheres 52.1
2654 Male, age 80, both hemispheres 47.4
2337 Male, age 61, both hemispheres 46.9
2141 Male, age 76, both hemispheres 39.4
2360 Male, age 74, both hemispheres 37.3
Gigantocellular reticular nuclei, medullary
nTPM: 44.9
1876 Female, age 85, both hemispheres 47.8
2314 Male, age 61, both hemispheres 47.8
2387 Female, age 91, both hemispheres 46.0
2022 Male, age 76, right hemisphere 45.9
2310 Male, age 80, both hemispheres 43.1
2462 Male, age 74, both hemispheres 38.6
Gigantocellular reticular nuclei, pars
nTPM: 43.8
2084 Female, age 85, both hemispheres 47.4
2330 Male, age 80, both hemispheres 44.5
2706 Male, age 80, both hemispheres 43.8
2336 Male, age 61, both hemispheres 42.2
2168 Male, age 76, both hemispheres 41.3
Inferior olive
nTPM: 44.4
2628 Female, age 91, both hemispheres 47.8
2379 Male, age 80, both hemispheres 44.9
2085 Female, age 85, both hemispheres 44.1
2563 Male, age 74, both hemispheres 42.7
2178 Male, age 61, both hemispheres 42.5
Kolliker-Fuse nucleus
nTPM: 46.2
2793 Female, age 91, left hemisphere 50.7
2163 Male, age 80, both hemispheres 46.2
2315 Male, age 76, right hemisphere 41.8
Lateral lemniscal nuclei
nTPM: 43.5
2453 Male, age 74, right hemisphere 46.2
2169 Male, age 76, both hemispheres 45.0
2320 Female, age 91, left hemisphere 44.2
2746 Female, age 85, left hemisphere 41.9
2036 Male, age 80, both hemispheres 40.3
Lateral medullary reticular nucleus
nTPM: 45.7
2305 Male, age 74, both hemispheres 48.2
2044 Male, age 76, both hemispheres 48.0
2804 Female, age 91, both hemispheres 45.1
2374 Male, age 61, both hemispheres 44.9
2190 Female, age 85, both hemispheres 44.1
2852 Male, age 80, both hemispheres 43.8
Lateral parabrachial nucleus
nTPM: 47.6
2792 Male, age 76, both hemispheres 55.8
2013 Male, age 80, both hemispheres 48.5
2790 Male, age 61, both hemispheres 48.3
2139 Female, age 85, right hemisphere 37.9
Lateral vestibular nucleus
nTPM: 45.2
2184 Male, age 76, both hemispheres 45.9
2311 Male, age 80, both hemispheres 44.6
Locus coeruleus
nTPM: 46.0
2014 Male, age 55, unknown 53.6
2788 Male, age 74, unknown 51.7
2720 Male, age 74, both hemispheres 49.0
1980 Male, age 76, both hemispheres 42.6
2162 Male, age 80, both hemispheres 42.3
2317 Female, age 72, unknown 42.3
2123 Female, age 91, both hemispheres 40.7
Medial olivary nucleus
nTPM: 48.1
1943 Male, age 61, both hemispheres 54.0
1962 Male, age 76, both hemispheres 48.9
2851 Male, age 80, both hemispheres 45.3
2138 Female, age 91, both hemispheres 44.1
Medial parabrachial nucleus
nTPM: 45.5
2170 Female, age 91, both hemispheres 49.2
2854 Male, age 80, both hemispheres 46.5
2156 Male, age 61, both hemispheres 46.0
2786 Male, age 76, both hemispheres 44.4
2463 Female, age 85, right hemisphere 41.4
Medial periolivary nuclei
nTPM: 44.1
2081 Male, age 80, both hemispheres 46.3
2458 Female, age 91, both hemispheres 45.2
2791 Male, age 74, right hemisphere 43.5
2171 Female, age 85, both hemispheres 42.8
2063 Male, age 76, both hemispheres 42.7
Medial vestibular nucleus
nTPM: 45.6
2803 Female, age 91, both hemispheres 51.3
2801 Male, age 74, both hemispheres 47.2
2093 Male, age 80, both hemispheres 45.7
2624 Male, age 61, both hemispheres 45.3
2134 Male, age 76, both hemispheres 43.8
2743 Female, age 85, both hemispheres 40.4
Motor facial nucleus
nTPM: 45.4
2697 Female, age 85, both hemispheres 50.9
2327 Male, age 80, both hemispheres 47.8
2126 Male, age 61, both hemispheres 46.3
2365 Male, age 74, right hemisphere 45.2
2795 Female, age 91, both hemispheres 43.1
2062 Male, age 76, both hemispheres 39.2
Motor hypoglossal nucleus
nTPM: 46.0
2461 Male, age 61, both hemispheres 52.7
2132 Female, age 85, both hemispheres 49.6
2125 Female, age 91, both hemispheres 45.0
2182 Male, age 80, both hemispheres 44.9
2277 Male, age 76, both hemispheres 38.0
Motor trigeminal nucleus
nTPM: 43.2
2079 Male, age 80, both hemispheres 44.7
2335 Male, age 61, both hemispheres 44.1
2309 Male, age 76, both hemispheres 43.9
2321 Female, age 91, both hemispheres 43.2
2560 Male, age 74, both hemispheres 39.9
Nuclei of the trapezoid body
nTPM: 41.7
2368 Female, age 91, both hemispheres 45.2
2166 Male, age 80, both hemispheres 44.0
2159 Male, age 61, both hemispheres 41.5
1983 Male, age 76, both hemispheres 40.2
2735 Female, age 85, both hemispheres 37.7
Nucleus ambiguus
nTPM: 43.4
2071 Male, age 76, both hemispheres 45.3
2096 Female, age 85, both hemispheres 41.5
Nucleus cuneatus
nTPM: 43.1
2380 Male, age 80, both hemispheres 47.9
2808 Female, age 85, both hemispheres 45.7
2805 Female, age 91, both hemispheres 42.8
2564 Male, age 74, both hemispheres 42.6
2100 Male, age 76, both hemispheres 41.0
2562 Male, age 61, both hemispheres 38.6
Nucleus gracilis
nTPM: 43.6
2382 Male, age 80, both hemispheres 47.5
2627 Male, age 74, both hemispheres 42.2
2299 Female, age 85, both hemispheres 41.3
Nucleus raphe magnus
nTPM: 43.1
2051 Male, age 76, both hemispheres 44.6
2328 Male, age 80, both hemispheres 44.4
2172 Female, age 85, both hemispheres 42.7
2459 Female, age 91, both hemispheres 42.7
2455 Male, age 74, both hemispheres 42.5
2160 Male, age 61, both hemispheres 41.4
Nucleus raphe obscurus
nTPM: 52.4
2845 Female, age 85, midline 56.1
2800 Male, age 61, midline 51.1
2142 Male, age 76, midline 50.2
Nucleus raphe pallidus
nTPM: 49.1
1924 Male, age 61, midline 53.3
2145 Male, age 76, midline 47.1
2183 Male, age 80, midline 47.0
Nucleus tractus solitarii
nTPM: 37.8
2144 Female, age 91, right hemisphere 43.0
2656 Male, age 76, both hemispheres 37.9
2307 Male, age 80, both hemispheres 35.7
2191 Female, age 85, both hemispheres 34.3
Paramedian reticular nucleus
nTPM: 49.1
2052 Male, age 76, both hemispheres 55.1
2050 Female, age 85, both hemispheres 48.9
2057 Male, age 80, both hemispheres 46.4
2313 Male, age 61, both hemispheres 45.8
Parvicellular reticular nuclei
nTPM: 45.7
2119 Male, age 80, both hemispheres 48.8
2095 Male, age 76, both hemispheres 46.7
2558 Male, age 74, both hemispheres 41.7
Parvicellular reticular nuclei, medullary
nTPM: 42.5
2189 Female, age 91, both hemispheres 43.8
2181 Male, age 80, left hemisphere 42.0
2091 Female, age 85, both hemispheres 41.7
Peritrigeminal nucleus
nTPM: 45.2
2179 Male, age 61, both hemispheres 47.1
2136 Male, age 76, both hemispheres 46.4
2067 Female, age 85, both hemispheres 42.0
Pontine nuclei
nTPM: 44.7
2454 Male, age 74, left hemisphere 50.6
2319 Female, age 91, both hemispheres 48.1
1863 Male, age 55, unknown 47.2
2727 Male, age 61, right hemisphere 44.4
2115 Male, age 80, left hemisphere 42.7
2109 Female, age 72, unknown 42.3
1968 Male, age 76, left hemisphere 41.3
2787 Female, age 85, both hemispheres 41.0
Pontine raphe nucleus
nTPM: 43.7
2122 Female, age 85, midline 43.9
2853 Male, age 76, midline 43.5
Posteroventral cochlear nucleus
nTPM: 48.6
2135 Female, age 91, both hemispheres 56.3
2341 Male, age 80, both hemispheres 56.2
2070 Male, age 76, both hemispheres 46.4
2752 Female, age 85, both hemispheres 44.0
2371 Male, age 61, both hemispheres 39.9
Prepositus hypoglossal nucleus
nTPM: 43.2
2855 Female, age 85, right hemisphere 48.8
2086 Male, age 80, both hemispheres 37.5
Principal sensory trigeminal nucleus
nTPM: 43.8
2367 Female, age 91, left hemisphere 46.1
2324 Male, age 76, both hemispheres 44.2
2158 Male, age 61, both hemispheres 43.6
2008 Male, age 80, left hemisphere 41.2
Reticular pontine nucleus, caudal
nTPM: 45.0
2457 Female, age 91, both hemispheres 50.0
2559 Male, age 74, both hemispheres 44.2
2092 Male, age 76, both hemispheres 43.0
2332 Male, age 80, right hemisphere 42.8
Reticular pontine nucleus, oral
nTPM: 46.3
1939 Male, age 80, both hemispheres 51.4
2366 Female, age 91, both hemispheres 50.6
2012 Female, age 85, both hemispheres 47.1
2167 Male, age 76, both hemispheres 45.0
2361 Male, age 74, both hemispheres 37.5
Reticulotegmental nucleus
nTPM: 46.5
2322 Female, age 91, both hemispheres 51.0
2333 Male, age 80, both hemispheres 45.8
2325 Male, age 76, both hemispheres 45.0
2452 Male, age 74, both hemispheres 44.1
Spinal trigeminal nucleus, caudal
nTPM: 43.2
2390 Female, age 91, both hemispheres 49.4
2308 Male, age 80, both hemispheres 42.3
2447 Male, age 76, both hemispheres 42.1
2642 Male, age 74, both hemispheres 41.2
2312 Male, age 61, both hemispheres 41.1
Spinal trigeminal nucleus, interpolar
nTPM: 46.5
2625 Male, age 61, both hemispheres 49.9
2033 Male, age 80, both hemispheres 49.7
2066 Male, age 76, right hemisphere 45.9
2386 Female, age 85, both hemispheres 43.4
2389 Female, age 91, both hemispheres 43.4
Spinal trigeminal nucleus, oral
nTPM: 42.5
2164 Male, age 80, both hemispheres 46.5
2737 Female, age 85, both hemispheres 40.7
1978 Male, age 76, both hemispheres 40.2
Spinal vestibular nucleus
nTPM: 47.0
2806 Female, age 85, both hemispheres 52.1
2384 Male, age 74, both hemispheres 50.5
2748 Male, age 76, both hemispheres 47.0
2796 Male, age 61, both hemispheres 44.6
2186 Female, age 91, both hemispheres 44.3
2780 Male, age 80, both hemispheres 43.8
Subcoeruleus area
nTPM: 44.6
2369 Female, age 85, left hemisphere 53.3
1958 Male, age 80, both hemispheres 45.2
2323 Female, age 91, left hemisphere 44.0
2451 Male, age 74, both hemispheres 40.9
2089 Male, age 76, left hemisphere 39.6
Superior olive
nTPM: 45.0
2020 Male, age 76, both hemispheres 48.6
2561 Female, age 91, both hemispheres 46.4
1875 Female, age 85, both hemispheres 45.9
2329 Male, age 80, right hemisphere 43.0
2364 Male, age 74, right hemisphere 41.3
Superior vestibular nucleus
nTPM: 41.1
2015 Male, age 80, both hemispheres 45.4
2383 Male, age 74, both hemispheres 39.2
2061 Male, age 76, both hemispheres 38.7
Ventral medullary reticular nucleus
nTPM: 45.0
2060 Male, age 76, both hemispheres 47.4
2372 Male, age 61, both hemispheres 42.6
Ventral periolivary nuclei
nTPM: 44.5
2023 Male, age 76, both hemispheres 50.7
2165 Male, age 80, both hemispheres 43.6
2794 Female, age 91, left hemisphere 42.1
2130 Female, age 85, both hemispheres 41.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 45.5
1986 Male, age 76, both hemispheres 47.3
2741 Female, age 85, both hemispheres 47.0
2118 Male, age 80, both hemispheres 45.0
2180 Male, age 61, both hemispheres 44.7
2302 Female, age 91, both hemispheres 43.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 45.8
2359 Male, age 61, both hemispheres 50.6
2840 Female, age 85, both hemispheres 49.2
1959 Male, age 76, both hemispheres 46.9
2456 Female, age 91, both hemispheres 45.4
2449 Male, age 74, both hemispheres 41.9
2161 Male, age 80, both hemispheres 40.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 159.0
FF:10182-103D2 60 years, female 207.3
FF:10165-103B3 76 years, female 110.8
Medulla oblongata
Scaled Tags Per Million: 104.7
FF:10174-103C3 60 years, female 121.5
FF:10038-101F2 18-64 years, mixed 119.7
FF:10155-103A2 76 years, female 72.9
Pons
Scaled Tags Per Million: 143.7
FF:10033-101E6 18-54 years, mixed 143.7

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 29.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 27.7
Samples: 4

Max nTPM: 29.1
Min nTPM: 25.8
Sample A Female 29.1
Sample B Female 25.8
Sample C Male 29.1
Sample D Male 26.8
Pons
nTPM: 29.2
Samples: 4

Max nTPM: 37.6
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 24.8
Sample C Male 37.6
Sample D Male 31.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 31.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 31.6
Samples: 4

Max nTPM: 33.7
Min nTPM: 28.2
Sample A Male 28.2
Sample B Male 32.2
Sample C Female 32.4
Sample D Female 33.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
71280907 Antisense, RP_050818_01_G12, Mouse strain C57BL/6J (56 days, male) 0.5
Pons
Expression energy: 0.2
71280907 Antisense, RP_050818_01_G12, Mouse strain C57BL/6J (56 days, male) 0.2

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