HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:457.6 nTPM
HPA:457.6 nTPM
GTEx:499.9 nTPM
FANTOM5:337.0 Scaled Tags Per Million
Pig:170.1 nTPM
Mouse:264.5 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058951Antibody HPA065649
Glial cells HighHigh
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 457.6
Sample id Sample description nTPM
Hippocampus
nTPM: 407.3
2621 Female, age 67, right hemisphere 429.2
2529 Female, age 94, left hemisphere 419.5
1898 Male, age 80, left hemisphere 419.1
2148 Female, age 91, left hemisphere 401.6
1911 Female, age 85, right hemisphere 400.4
1855 Male, age 76, left hemisphere 374.2
Dentate gyrus
nTPM: 425.5
2530 Female, age 94, left hemisphere 553.4
2010 Male, age 76, both hemispheres 417.7
2246 Female, age 85, both hemispheres 408.3
2531 Female, age 67, both hemispheres 403.7
2528 Male, age 74, both hemispheres 390.5
1927 Female, age 91, both hemispheres 379.2
Entorhinal gyrus
nTPM: 444.6
2117 Female, age 91, right hemisphere 527.8
2764 Male, age 80, right hemisphere 487.1
2686 Male, age 75, right hemisphere 424.2
1938 Female, age 85, left hemisphere 418.3
2613 Female, age 94, left hemisphere 412.3
1787 Male, age 76, left hemisphere 397.7
Hippocampus, CA1
nTPM: 387.0
2527 Male, age 74, both hemispheres 428.9
2749 Male, age 80, left hemisphere 392.1
1873 Female, age 85, both hemispheres 388.4
2082 Female, age 91, right hemisphere 388.4
2045 Male, age 76, both hemispheres 337.2
Hippocampus, CA2
nTPM: 437.2
1963 Male, age 80, left hemisphere 522.6
2437 Female, age 94, left hemisphere 442.9
2249 Male, age 74, both hemispheres 438.1
1940 Female, age 85, left hemisphere 433.9
2113 Female, age 91, right hemisphere 406.6
1892 Male, age 76, both hemispheres 378.8
Hippocampus, CA3
nTPM: 385.1
1891 Female, age 85, both hemispheres 479.6
1867 Male, age 76, both hemispheres 397.8
2861 Female, age 67, both hemispheres 369.5
2436 Male, age 74, both hemispheres 364.3
2137 Male, age 80, left hemisphere 350.2
2620 Female, age 94, left hemisphere 349.5
Parahippocampal cortex
nTPM: 405.2
1990 Female, age 91, right hemisphere 454.4
2692 Male, age 74, both hemispheres 449.9
2532 Female, age 72, left hemisphere 433.7
1850 Male, age 80, both hemispheres 423.2
1933 Female, age 85, both hemispheres 400.5
2018 Male, age 76, both hemispheres 397.4
2245 Female, age 91, both hemispheres 388.6
2250 Female, age 67, right hemisphere 374.0
2693 Female, age 94, both hemispheres 373.6
2622 Female, age 67, right hemisphere 356.6
Perirhinal gyrus
nTPM: 377.2
1847 Female, age 91, left hemisphere 383.4
2848 Male, age 76, right hemisphere 381.4
1841 Female, age 85, right hemisphere 376.0
1794 Male, age 80, right hemisphere 375.8
2521 Female, age 94, right hemisphere 369.5
Subiculum
nTPM: 457.6
1901 Male, age 80, both hemispheres 511.1
2042 Male, age 76, both hemispheres 491.8
2438 Female, age 94, left hemisphere 465.7
1977 Female, age 85, both hemispheres 464.5
2619 Male, age 74, both hemispheres 413.4
2729 Female, age 91, right hemisphere 399.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 499.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 499.9
Samples: 197

Max nTPM: 1863.6
Min nTPM: 78.3
Std nTPM: 292.9
Median nTPM: 430.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1863.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1770.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1691.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1336.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1316.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 1148.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1146.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 1091.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1047.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 992.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 987.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 337.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 337.0
FF:10153-102I9 76 years, female 455.3
FF:10169-103B7 60 years, female 218.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 170.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 170.1
Samples: 4

Max nTPM: 278.5
Min nTPM: 65.9
Sample A Female 278.5
Sample B Female 112.7
Sample C Male 223.3
Sample D Male 65.9
Entorhinal cortex
nTPM: 74.1
Samples: 4

Max nTPM: 93.0
Min nTPM: 63.3
Sample A Female 63.3
Sample B Female 93.0
Sample C Male 75.8
Sample D Male 64.4
Subiculum
nTPM: 85.4
Samples: 4

Max nTPM: 112.4
Min nTPM: 74.0
Sample A Female 112.4
Sample B Female 79.0
Sample C Male 74.0
Sample D Male 76.2
Ventral hippocampus
nTPM: 119.6
Samples: 4

Max nTPM: 145.1
Min nTPM: 64.6
Sample A Female 137.5
Sample B Female 64.6
Sample C Male 131.1
Sample D Male 145.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 264.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.5
Samples: 4

Max nTPM: 213.5
Min nTPM: 113.5
Sample A Male 213.5
Sample B Male 174.9
Sample C Female 159.9
Sample D Female 113.5
Hippocampal formation
nTPM: 264.5
Samples: 4

Max nTPM: 291.6
Min nTPM: 247.0
Sample A Male 259.2
Sample B Male 260.2
Sample C Female 291.6
Sample D Female 247.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
75042261 Antisense, RP_060412_02_D03, Mouse strain C57BL/6J (56 days, male) 8.1
631703 Antisense, RP_040907_01_A03, Mouse strain C57BL/6J (56 days, male) 7.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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