HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:138.2 nTPM
HPA:138.2 nTPM
GTEx:24.4 nTPM
FANTOM5:129.0 Scaled Tags Per Million
Pig:355.4 nTPM
Mouse:456.5 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061006
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 138.2
Sample id Sample description nTPM
Hippocampus
nTPM: 102.4
2529 Female, age 94, left hemisphere 305.0
1855 Male, age 76, left hemisphere 103.4
1898 Male, age 80, left hemisphere 101.6
2621 Female, age 67, right hemisphere 65.6
1911 Female, age 85, right hemisphere 38.9
2148 Female, age 91, left hemisphere 0.0
Dentate gyrus
nTPM: 138.2
2530 Female, age 94, left hemisphere 505.4
2531 Female, age 67, both hemispheres 159.5
2010 Male, age 76, both hemispheres 77.1
2528 Male, age 74, both hemispheres 49.8
2246 Female, age 85, both hemispheres 37.6
1927 Female, age 91, both hemispheres 0.0
Entorhinal gyrus
nTPM: 112.7
2686 Male, age 75, right hemisphere 285.6
2764 Male, age 80, right hemisphere 208.1
2117 Female, age 91, right hemisphere 84.5
1938 Female, age 85, left hemisphere 65.6
1787 Male, age 76, left hemisphere 32.7
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 76.1
2749 Male, age 80, left hemisphere 189.9
2527 Male, age 74, both hemispheres 159.6
2045 Male, age 76, both hemispheres 21.2
1873 Female, age 85, both hemispheres 9.6
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 61.0
2437 Female, age 94, left hemisphere 191.7
1892 Male, age 76, both hemispheres 86.7
1940 Female, age 85, left hemisphere 45.4
2249 Male, age 74, both hemispheres 42.5
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
Hippocampus, CA3
nTPM: 107.3
2861 Female, age 67, both hemispheres 319.8
1867 Male, age 76, both hemispheres 157.0
1891 Female, age 85, both hemispheres 113.6
2436 Male, age 74, both hemispheres 30.1
2137 Male, age 80, left hemisphere 23.2
2620 Female, age 94, left hemisphere 0.0
Parahippocampal cortex
nTPM: 71.9
2245 Female, age 91, both hemispheres 215.4
2018 Male, age 76, both hemispheres 154.5
2532 Female, age 72, left hemisphere 100.5
2250 Female, age 67, right hemisphere 95.0
2692 Male, age 74, both hemispheres 88.5
1850 Male, age 80, both hemispheres 35.0
1933 Female, age 85, both hemispheres 30.3
1990 Female, age 91, right hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 21.6
2848 Male, age 76, right hemisphere 64.8
1847 Female, age 91, left hemisphere 38.5
1841 Female, age 85, right hemisphere 4.8
1794 Male, age 80, right hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 66.0
1977 Female, age 85, both hemispheres 147.8
2438 Female, age 94, left hemisphere 96.1
2042 Male, age 76, both hemispheres 89.1
1901 Male, age 80, both hemispheres 63.2
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.4
Samples: 197

Max nTPM: 123.2
Min nTPM: 2.7
Std nTPM: 22.3
Median nTPM: 15.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 123.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 100.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 96.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 90.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 90.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 85.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 84.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 83.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 78.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 72.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 71.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.0
FF:10153-102I9 76 years, female 140.9
FF:10169-103B7 60 years, female 117.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 355.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 194.6
Samples: 4

Max nTPM: 251.5
Min nTPM: 106.4
Sample A Female 251.5
Sample B Female 173.7
Sample C Male 246.6
Sample D Male 106.4
Entorhinal cortex
nTPM: 355.4
Samples: 4

Max nTPM: 442.8
Min nTPM: 283.0
Sample A Female 322.5
Sample B Female 442.8
Sample C Male 373.3
Sample D Male 283.0
Subiculum
nTPM: 321.9
Samples: 4

Max nTPM: 478.0
Min nTPM: 234.1
Sample A Female 478.0
Sample B Female 309.7
Sample C Male 265.6
Sample D Male 234.1
Ventral hippocampus
nTPM: 239.6
Samples: 4

Max nTPM: 313.6
Min nTPM: 179.2
Sample A Female 247.9
Sample B Female 179.2
Sample C Male 313.6
Sample D Male 217.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 456.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 456.5
Samples: 4

Max nTPM: 510.1
Min nTPM: 403.1
Sample A Male 473.8
Sample B Male 510.1
Sample C Female 403.1
Sample D Female 439.1
Hippocampal formation
nTPM: 302.1
Samples: 4

Max nTPM: 376.7
Min nTPM: 270.0
Sample A Male 376.7
Sample B Male 278.9
Sample C Female 282.9
Sample D Female 270.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
71358557 Antisense, RP_050725_03_E06, Mouse strain C57BL/6J (56 days, male) 7.8
68798938 Antisense, RP_050217_01_F04, Mouse strain C57BL/6J (56 days, male) 5.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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