HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:41.3 nTPM
HPA:41.3 nTPM
GTEx:36.3 nTPM
FANTOM5:51.3 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:18.8 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.3
Sample id Sample description nTPM
Hippocampus
nTPM: 26.8
2529 Female, age 94, left hemisphere 31.1
1911 Female, age 85, right hemisphere 29.0
2621 Female, age 67, right hemisphere 28.7
2148 Female, age 91, left hemisphere 27.2
1898 Male, age 80, left hemisphere 22.9
1855 Male, age 76, left hemisphere 21.9
Dentate gyrus
nTPM: 27.6
2246 Female, age 85, both hemispheres 31.5
2530 Female, age 94, left hemisphere 29.6
2531 Female, age 67, both hemispheres 29.3
1927 Female, age 91, both hemispheres 27.3
2528 Male, age 74, both hemispheres 25.9
2010 Male, age 76, both hemispheres 21.9
Entorhinal gyrus
nTPM: 36.6
1938 Female, age 85, left hemisphere 41.0
2686 Male, age 75, right hemisphere 40.0
2613 Female, age 94, left hemisphere 38.2
1787 Male, age 76, left hemisphere 35.7
2764 Male, age 80, right hemisphere 34.6
2117 Female, age 91, right hemisphere 30.0
Hippocampus, CA1
nTPM: 27.6
2082 Female, age 91, right hemisphere 28.4
2045 Male, age 76, both hemispheres 28.2
2749 Male, age 80, left hemisphere 28.2
2527 Male, age 74, both hemispheres 27.5
1873 Female, age 85, both hemispheres 25.7
Hippocampus, CA2
nTPM: 27.6
2113 Female, age 91, right hemisphere 31.0
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 27.5
2249 Male, age 74, both hemispheres 26.7
1892 Male, age 76, both hemispheres 25.8
1963 Male, age 80, left hemisphere 24.2
Hippocampus, CA3
nTPM: 30.3
1891 Female, age 85, both hemispheres 35.6
2620 Female, age 94, left hemisphere 32.2
2436 Male, age 74, both hemispheres 30.2
1867 Male, age 76, both hemispheres 28.5
2861 Female, age 67, both hemispheres 28.5
2137 Male, age 80, left hemisphere 27.0
Parahippocampal cortex
nTPM: 36.0
1850 Male, age 80, both hemispheres 43.8
2693 Female, age 94, both hemispheres 38.9
2692 Male, age 74, both hemispheres 38.5
1933 Female, age 85, both hemispheres 38.4
2532 Female, age 72, left hemisphere 38.0
1990 Female, age 91, right hemisphere 34.9
2622 Female, age 67, right hemisphere 33.6
2018 Male, age 76, both hemispheres 32.5
2245 Female, age 91, both hemispheres 31.7
2250 Female, age 67, right hemisphere 29.2
Perirhinal gyrus
nTPM: 41.3
2848 Male, age 76, right hemisphere 43.9
1841 Female, age 85, right hemisphere 43.2
1794 Male, age 80, right hemisphere 43.1
1847 Female, age 91, left hemisphere 38.6
2521 Female, age 94, right hemisphere 37.6
Subiculum
nTPM: 32.1
2438 Female, age 94, left hemisphere 37.2
1901 Male, age 80, both hemispheres 34.6
1977 Female, age 85, both hemispheres 33.4
2619 Male, age 74, both hemispheres 32.5
2042 Male, age 76, both hemispheres 28.4
2729 Female, age 91, right hemisphere 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.3
Samples: 197

Max nTPM: 77.8
Min nTPM: 11.3
Std nTPM: 9.5
Median nTPM: 35.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 77.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 62.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 62.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 61.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 60.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 59.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 57.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 55.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 54.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.3
FF:10153-102I9 76 years, female 58.8
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 33.1
Min nTPM: 26.7
Sample A Female 29.7
Sample B Female 33.1
Sample C Male 26.7
Sample D Male 32.8
Entorhinal cortex
nTPM: 36.4
Samples: 4

Max nTPM: 37.9
Min nTPM: 33.6
Sample A Female 37.2
Sample B Female 36.8
Sample C Male 33.6
Sample D Male 37.9
Subiculum
nTPM: 33.1
Samples: 4

Max nTPM: 35.8
Min nTPM: 30.2
Sample A Female 35.8
Sample B Female 32.1
Sample C Male 34.3
Sample D Male 30.2
Ventral hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 33.8
Min nTPM: 31.8
Sample A Female 31.8
Sample B Female 33.8
Sample C Male 32.4
Sample D Male 33.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 21.3
Min nTPM: 16.4
Sample A Male 18.5
Sample B Male 21.3
Sample C Female 18.9
Sample D Female 16.4
Hippocampal formation
nTPM: 16.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 13.7
Sample A Male 19.8
Sample B Male 17.0
Sample C Female 13.7
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
70302111 Antisense, RP_050607_03_F04, Mouse strain C57BL/6J (56 days, male) 9.3
74988334 Antisense, RP_060315_05_D02, Mouse strain C57BL/6J (56 days, male) 4.2

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