HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.0 nTPM
HPA:41.0 nTPM
GTEx:38.1 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:7.9 nTPM
Mouse:19.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041353
Glial cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.0
Sample id Sample description nTPM
Hippocampus
nTPM: 39.9
1898 Male, age 80, left hemisphere 41.7
1855 Male, age 76, left hemisphere 41.3
2529 Female, age 94, left hemisphere 39.9
2621 Female, age 67, right hemisphere 39.4
2148 Female, age 91, left hemisphere 39.1
1911 Female, age 85, right hemisphere 38.0
Dentate gyrus
nTPM: 40.0
2530 Female, age 94, left hemisphere 42.8
2528 Male, age 74, both hemispheres 40.1
1927 Female, age 91, both hemispheres 39.7
2246 Female, age 85, both hemispheres 39.2
2531 Female, age 67, both hemispheres 39.2
2010 Male, age 76, both hemispheres 39.1
Entorhinal gyrus
nTPM: 40.8
2764 Male, age 80, right hemisphere 43.3
1787 Male, age 76, left hemisphere 41.8
2613 Female, age 94, left hemisphere 40.5
1938 Female, age 85, left hemisphere 40.4
2117 Female, age 91, right hemisphere 39.8
2686 Male, age 75, right hemisphere 38.9
Hippocampus, CA1
nTPM: 39.9
2749 Male, age 80, left hemisphere 42.8
2082 Female, age 91, right hemisphere 39.8
2527 Male, age 74, both hemispheres 39.5
2045 Male, age 76, both hemispheres 39.0
1873 Female, age 85, both hemispheres 38.6
Hippocampus, CA2
nTPM: 39.7
2437 Female, age 94, left hemisphere 43.1
1892 Male, age 76, both hemispheres 40.6
2249 Male, age 74, both hemispheres 39.5
1963 Male, age 80, left hemisphere 39.1
2113 Female, age 91, right hemisphere 38.0
1940 Female, age 85, left hemisphere 37.7
Hippocampus, CA3
nTPM: 39.3
1867 Male, age 76, both hemispheres 40.7
2137 Male, age 80, left hemisphere 39.9
1891 Female, age 85, both hemispheres 39.3
2436 Male, age 74, both hemispheres 39.1
2620 Female, age 94, left hemisphere 38.8
2861 Female, age 67, both hemispheres 37.7
Parahippocampal cortex
nTPM: 40.0
1850 Male, age 80, both hemispheres 42.5
2532 Female, age 72, left hemisphere 42.0
1990 Female, age 91, right hemisphere 40.8
2245 Female, age 91, both hemispheres 40.3
1933 Female, age 85, both hemispheres 40.2
2692 Male, age 74, both hemispheres 39.9
2018 Male, age 76, both hemispheres 39.7
2693 Female, age 94, both hemispheres 38.6
2622 Female, age 67, right hemisphere 38.1
2250 Female, age 67, right hemisphere 37.7
Perirhinal gyrus
nTPM: 41.0
1794 Male, age 80, right hemisphere 42.6
2521 Female, age 94, right hemisphere 41.4
1847 Female, age 91, left hemisphere 41.3
2848 Male, age 76, right hemisphere 39.9
1841 Female, age 85, right hemisphere 39.6
Subiculum
nTPM: 40.2
2438 Female, age 94, left hemisphere 41.4
1901 Male, age 80, both hemispheres 41.1
1977 Female, age 85, both hemispheres 40.7
2619 Male, age 74, both hemispheres 39.7
2042 Male, age 76, both hemispheres 39.4
2729 Female, age 91, right hemisphere 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.1
Samples: 197

Max nTPM: 64.5
Min nTPM: 15.6
Std nTPM: 7.9
Median nTPM: 37.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 64.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 58.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 58.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 57.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 57.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 55.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 54.2
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 52.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 51.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 51.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.7
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 27.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.6
Sample A Female 9.1
Sample B Female 6.6
Sample C Male 8.4
Sample D Male 7.5
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 7.7
Sample C Male 7.3
Sample D Male 7.9
Subiculum
nTPM: 7.2
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.2
Sample A Female 8.3
Sample B Female 7.3
Sample C Male 7.1
Sample D Male 6.2
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.6
Sample A Female 7.1
Sample B Female 6.6
Sample C Male 8.6
Sample D Male 7.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 10.3
Sample A Male 13.4
Sample B Male 17.4
Sample C Female 11.7
Sample D Female 10.3
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 23.1
Min nTPM: 15.3
Sample A Male 15.3
Sample B Male 18.7
Sample C Female 23.1
Sample D Female 19.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69549178 Antisense, RP_050118_02_H10, Mouse strain C57BL/6J (56 days, male) 0.0

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