HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.0 nTPM
HPA:16.0 nTPM
GTEx:20.2 nTPM
FANTOM5:68.6 Scaled Tags Per Million
Pig:47.7 nTPM
Mouse:57.9 nTPM
Allen mouse:19.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036835Antibody HPA045893
Glial cells LowLow
Neuronal cells Not detectedMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.0
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2621 Female, age 67, right hemisphere 23.1
1855 Male, age 76, left hemisphere 19.4
2529 Female, age 94, left hemisphere 15.0
1898 Male, age 80, left hemisphere 12.9
1911 Female, age 85, right hemisphere 10.4
2148 Female, age 91, left hemisphere 9.9
Dentate gyrus
nTPM: 10.9
2530 Female, age 94, left hemisphere 18.3
2531 Female, age 67, both hemispheres 14.7
2246 Female, age 85, both hemispheres 13.3
2010 Male, age 76, both hemispheres 10.7
1927 Female, age 91, both hemispheres 8.7
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 14.9
2686 Male, age 75, right hemisphere 25.0
1938 Female, age 85, left hemisphere 15.9
2764 Male, age 80, right hemisphere 14.6
2613 Female, age 94, left hemisphere 13.6
2117 Female, age 91, right hemisphere 10.4
1787 Male, age 76, left hemisphere 9.7
Hippocampus, CA1
nTPM: 11.2
2749 Male, age 80, left hemisphere 19.2
2045 Male, age 76, both hemispheres 13.7
2527 Male, age 74, both hemispheres 9.4
1873 Female, age 85, both hemispheres 7.4
2082 Female, age 91, right hemisphere 6.2
Hippocampus, CA2
nTPM: 9.3
2437 Female, age 94, left hemisphere 12.5
1963 Male, age 80, left hemisphere 11.3
1940 Female, age 85, left hemisphere 10.7
1892 Male, age 76, both hemispheres 9.2
2113 Female, age 91, right hemisphere 7.2
2249 Male, age 74, both hemispheres 4.6
Hippocampus, CA3
nTPM: 13.6
2137 Male, age 80, left hemisphere 20.4
2861 Female, age 67, both hemispheres 18.6
1867 Male, age 76, both hemispheres 12.1
1891 Female, age 85, both hemispheres 10.7
2436 Male, age 74, both hemispheres 10.2
2620 Female, age 94, left hemisphere 9.4
Parahippocampal cortex
nTPM: 15.1
2622 Female, age 67, right hemisphere 21.9
2532 Female, age 72, left hemisphere 21.5
1850 Male, age 80, both hemispheres 20.8
2692 Male, age 74, both hemispheres 19.3
2245 Female, age 91, both hemispheres 16.4
1933 Female, age 85, both hemispheres 13.6
2018 Male, age 76, both hemispheres 13.4
2693 Female, age 94, both hemispheres 8.5
2250 Female, age 67, right hemisphere 8.0
1990 Female, age 91, right hemisphere 7.4
Perirhinal gyrus
nTPM: 16.0
1847 Female, age 91, left hemisphere 18.6
1794 Male, age 80, right hemisphere 18.2
2848 Male, age 76, right hemisphere 15.5
1841 Female, age 85, right hemisphere 15.0
2521 Female, age 94, right hemisphere 12.7
Subiculum
nTPM: 15.1
2438 Female, age 94, left hemisphere 30.3
2042 Male, age 76, both hemispheres 16.1
1901 Male, age 80, both hemispheres 14.9
1977 Female, age 85, both hemispheres 13.0
2619 Male, age 74, both hemispheres 12.0
2729 Female, age 91, right hemisphere 4.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.2
Samples: 197

Max nTPM: 33.6
Min nTPM: 11.4
Std nTPM: 4.1
Median nTPM: 20.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 33.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 31.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 30.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 29.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 28.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 28.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 27.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.6
FF:10153-102I9 76 years, female 74.5
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.7
Samples: 4

Max nTPM: 56.0
Min nTPM: 37.3
Sample A Female 56.0
Sample B Female 47.4
Sample C Male 50.0
Sample D Male 37.3
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 47.0
Min nTPM: 38.3
Sample A Female 47.0
Sample B Female 46.1
Sample C Male 43.1
Sample D Male 38.3
Subiculum
nTPM: 44.1
Samples: 4

Max nTPM: 53.0
Min nTPM: 40.6
Sample A Female 53.0
Sample B Female 41.3
Sample C Male 41.4
Sample D Male 40.6
Ventral hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 50.6
Min nTPM: 35.8
Sample A Female 44.4
Sample B Female 35.8
Sample C Male 45.1
Sample D Male 50.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.9
Samples: 4

Max nTPM: 70.8
Min nTPM: 53.1
Sample A Male 54.0
Sample B Male 53.6
Sample C Female 53.1
Sample D Female 70.8
Hippocampal formation
nTPM: 52.9
Samples: 4

Max nTPM: 60.8
Min nTPM: 45.4
Sample A Male 45.4
Sample B Male 57.6
Sample C Female 60.8
Sample D Female 47.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.8
67815967 Antisense, RP_040920_02_D10, Mouse strain C57BL/6J (56 days, male) 19.8

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