HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:66.9 nTPM
HPA:66.9 nTPM
GTEx:26.1 nTPM
FANTOM5:116.3 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:128.1 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018520Antibody HPA021051Antibody HPA029426
Glial cells Not detectedMediumNot detected
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.9
Sample id Sample description nTPM
Hippocampus
nTPM: 62.0
1898 Male, age 80, left hemisphere 69.9
1855 Male, age 76, left hemisphere 61.9
2621 Female, age 67, right hemisphere 61.4
2529 Female, age 94, left hemisphere 60.8
1911 Female, age 85, right hemisphere 60.5
2148 Female, age 91, left hemisphere 57.2
Dentate gyrus
nTPM: 61.3
1927 Female, age 91, both hemispheres 69.3
2010 Male, age 76, both hemispheres 66.6
2246 Female, age 85, both hemispheres 60.2
2528 Male, age 74, both hemispheres 59.5
2530 Female, age 94, left hemisphere 56.2
2531 Female, age 67, both hemispheres 56.1
Entorhinal gyrus
nTPM: 58.1
1938 Female, age 85, left hemisphere 63.5
2764 Male, age 80, right hemisphere 61.4
1787 Male, age 76, left hemisphere 60.0
2117 Female, age 91, right hemisphere 56.8
2686 Male, age 75, right hemisphere 54.3
2613 Female, age 94, left hemisphere 52.9
Hippocampus, CA1
nTPM: 66.0
2749 Male, age 80, left hemisphere 79.3
1873 Female, age 85, both hemispheres 68.2
2045 Male, age 76, both hemispheres 62.9
2527 Male, age 74, both hemispheres 62.0
2082 Female, age 91, right hemisphere 57.8
Hippocampus, CA2
nTPM: 63.4
1892 Male, age 76, both hemispheres 73.0
1963 Male, age 80, left hemisphere 67.3
2249 Male, age 74, both hemispheres 65.1
1940 Female, age 85, left hemisphere 60.1
2113 Female, age 91, right hemisphere 57.7
2437 Female, age 94, left hemisphere 57.4
Hippocampus, CA3
nTPM: 62.6
2137 Male, age 80, left hemisphere 69.2
1867 Male, age 76, both hemispheres 66.9
2436 Male, age 74, both hemispheres 66.5
1891 Female, age 85, both hemispheres 60.9
2620 Female, age 94, left hemisphere 56.3
2861 Female, age 67, both hemispheres 55.7
Parahippocampal cortex
nTPM: 60.9
1850 Male, age 80, both hemispheres 67.8
1933 Female, age 85, both hemispheres 64.3
2250 Female, age 67, right hemisphere 63.8
1990 Female, age 91, right hemisphere 62.6
2018 Male, age 76, both hemispheres 62.4
2245 Female, age 91, both hemispheres 60.9
2693 Female, age 94, both hemispheres 59.2
2532 Female, age 72, left hemisphere 58.7
2622 Female, age 67, right hemisphere 55.4
2692 Male, age 74, both hemispheres 53.7
Perirhinal gyrus
nTPM: 66.9
1847 Female, age 91, left hemisphere 72.3
1841 Female, age 85, right hemisphere 69.3
1794 Male, age 80, right hemisphere 68.0
2848 Male, age 76, right hemisphere 63.1
2521 Female, age 94, right hemisphere 61.7
Subiculum
nTPM: 59.0
1901 Male, age 80, both hemispheres 62.7
1977 Female, age 85, both hemispheres 62.5
2042 Male, age 76, both hemispheres 58.6
2729 Female, age 91, right hemisphere 57.1
2438 Female, age 94, left hemisphere 57.0
2619 Male, age 74, both hemispheres 56.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.1
Samples: 197

Max nTPM: 79.1
Min nTPM: 3.5
Std nTPM: 13.2
Median nTPM: 23.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 79.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 75.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 74.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 66.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 60.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 55.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 55.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 54.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 54.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.3
FF:10169-103B7 60 years, female 144.3
FF:10153-102I9 76 years, female 88.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 54.2
Min nTPM: 39.2
Sample A Female 54.2
Sample B Female 48.6
Sample C Male 39.6
Sample D Male 39.2
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 43.5
Min nTPM: 32.7
Sample A Female 41.6
Sample B Female 43.5
Sample C Male 34.7
Sample D Male 32.7
Subiculum
nTPM: 39.6
Samples: 4

Max nTPM: 45.4
Min nTPM: 35.8
Sample A Female 45.4
Sample B Female 36.3
Sample C Male 35.8
Sample D Male 41.0
Ventral hippocampus
nTPM: 39.8
Samples: 4

Max nTPM: 45.9
Min nTPM: 32.2
Sample A Female 45.4
Sample B Female 32.2
Sample C Male 35.8
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 128.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 128.1
Samples: 4

Max nTPM: 139.5
Min nTPM: 122.4
Sample A Male 122.4
Sample B Male 125.1
Sample C Female 125.4
Sample D Female 139.5
Hippocampal formation
nTPM: 124.9
Samples: 4

Max nTPM: 135.0
Min nTPM: 116.9
Sample A Male 135.0
Sample B Male 127.6
Sample C Female 116.9
Sample D Female 119.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
2079 Antisense, RP_040407_02_D07, Mouse strain C57BL/6J (56 days, male) 8.2
2080 Antisense, RP_040407_02_D07, Mouse strain C57BL/6J (56 days, male) 1.2

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