PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:290.3 nTPM
HPA:290.3 nTPM
FANTOM5:410.1 Scaled Tags Per Million
Mouse:607.7 nTPM
Allen mouse:8.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 290.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 251.4
1984 Male, age 76, both hemispheres 273.0
2301 Female, age 85, both hemispheres 248.5
2188 Female, age 91, both hemispheres 243.8
2090 Male, age 80, both hemispheres 240.3
Area postrema
nTPM: 229.7
2054 Male, age 76, both hemispheres 257.9
2799 Male, age 61, both hemispheres 215.7
2306 Male, age 80, both hemispheres 215.6
Cuneate nuclei
nTPM: 257.4
2131 Male, age 76, both hemispheres 271.1
2376 Male, age 61, both hemispheres 252.6
2381 Male, age 80, both hemispheres 248.6
Dorsal cochlear nucleus
nTPM: 255.3
2187 Female, age 91, both hemispheres 262.7
2058 Male, age 76, both hemispheres 258.3
2802 Male, age 74, right hemisphere 258.0
2370 Male, age 61, both hemispheres 255.4
2378 Male, age 80, both hemispheres 242.1
Dorsal medullary reticular nucleus
nTPM: 269.4
2040 Female, age 85, both hemispheres 294.3
2373 Male, age 61, both hemispheres 258.0
2088 Male, age 76, both hemispheres 255.9
Dorsal motor vagal complex
nTPM: 263.0
2000 Male, age 74, unknown 287.4
2813 Female, age 72, unknown 283.4
2844 Male, age 55, unknown 282.8
2133 Female, age 91, both hemispheres 282.0
2807 Female, age 85, both hemispheres 245.0
2643 Male, age 74, both hemispheres 243.9
2797 Male, age 61, both hemispheres 242.6
2185 Male, age 76, both hemispheres 237.0
Dorsal tegmental nucleus
nTPM: 259.7
2083 Male, age 80, both hemispheres 274.0
2326 Male, age 74, both hemispheres 262.5
1936 Male, age 76, left hemisphere 258.7
2358 Male, age 61, both hemispheres 243.4
Dorsolateral tegmental area
nTPM: 261.1
2141 Male, age 76, both hemispheres 276.2
2654 Male, age 80, both hemispheres 270.9
2751 Female, age 85, both hemispheres 269.7
2360 Male, age 74, both hemispheres 259.3
2337 Male, age 61, both hemispheres 229.3
Gigantocellular reticular nuclei, medullary
nTPM: 265.3
2022 Male, age 76, right hemisphere 294.6
1876 Female, age 85, both hemispheres 288.8
2462 Male, age 74, both hemispheres 265.3
2310 Male, age 80, both hemispheres 250.9
2387 Female, age 91, both hemispheres 249.8
2314 Male, age 61, both hemispheres 242.6
Gigantocellular reticular nuclei, pars
nTPM: 261.5
2084 Female, age 85, both hemispheres 285.7
2168 Male, age 76, both hemispheres 278.8
2336 Male, age 61, both hemispheres 265.2
2706 Male, age 80, both hemispheres 240.6
2330 Male, age 80, both hemispheres 237.1
Inferior olive
nTPM: 244.5
2563 Male, age 74, both hemispheres 268.4
2085 Female, age 85, both hemispheres 250.0
2628 Female, age 91, both hemispheres 241.3
2379 Male, age 80, both hemispheres 231.9
2178 Male, age 61, both hemispheres 231.1
Kolliker-Fuse nucleus
nTPM: 253.7
2163 Male, age 80, both hemispheres 280.4
2793 Female, age 91, left hemisphere 246.3
2315 Male, age 76, right hemisphere 234.4
Lateral lemniscal nuclei
nTPM: 267.7
2036 Male, age 80, both hemispheres 286.0
2169 Male, age 76, both hemispheres 284.9
2746 Female, age 85, left hemisphere 265.2
2453 Male, age 74, right hemisphere 255.7
2320 Female, age 91, left hemisphere 246.4
Lateral medullary reticular nucleus
nTPM: 254.7
2044 Male, age 76, both hemispheres 281.3
2305 Male, age 74, both hemispheres 258.3
2190 Female, age 85, both hemispheres 253.3
2804 Female, age 91, both hemispheres 252.9
2374 Male, age 61, both hemispheres 247.2
2852 Male, age 80, both hemispheres 235.3
Lateral parabrachial nucleus
nTPM: 254.4
2139 Female, age 85, right hemisphere 287.1
2790 Male, age 61, both hemispheres 253.3
2013 Male, age 80, both hemispheres 249.0
2792 Male, age 76, both hemispheres 228.4
Lateral vestibular nucleus
nTPM: 267.9
2184 Male, age 76, both hemispheres 277.8
2311 Male, age 80, both hemispheres 257.9
Locus coeruleus
nTPM: 274.5
2123 Female, age 91, both hemispheres 286.9
2788 Male, age 74, unknown 285.8
2720 Male, age 74, both hemispheres 281.8
2317 Female, age 72, unknown 271.7
2162 Male, age 80, both hemispheres 267.8
1980 Male, age 76, both hemispheres 264.3
2014 Male, age 55, unknown 263.3
Medial olivary nucleus
nTPM: 230.1
2138 Female, age 91, both hemispheres 239.8
2851 Male, age 80, both hemispheres 233.5
1962 Male, age 76, both hemispheres 224.1
1943 Male, age 61, both hemispheres 222.9
Medial parabrachial nucleus
nTPM: 267.3
2170 Female, age 91, both hemispheres 270.4
2786 Male, age 76, both hemispheres 270.1
2854 Male, age 80, both hemispheres 270.1
2463 Female, age 85, right hemisphere 264.8
2156 Male, age 61, both hemispheres 261.3
Medial periolivary nuclei
nTPM: 260.4
2171 Female, age 85, both hemispheres 293.9
2063 Male, age 76, both hemispheres 279.2
2791 Male, age 74, right hemisphere 259.5
2458 Female, age 91, both hemispheres 236.6
2081 Male, age 80, both hemispheres 232.8
Medial vestibular nucleus
nTPM: 280.8
2801 Male, age 74, both hemispheres 290.2
2803 Female, age 91, both hemispheres 285.1
2093 Male, age 80, both hemispheres 280.7
2134 Male, age 76, both hemispheres 278.2
2743 Female, age 85, both hemispheres 277.1
2624 Male, age 61, both hemispheres 273.3
Motor facial nucleus
nTPM: 263.6
2062 Male, age 76, both hemispheres 284.4
2697 Female, age 85, both hemispheres 269.7
2365 Male, age 74, right hemisphere 265.3
2126 Male, age 61, both hemispheres 258.4
2327 Male, age 80, both hemispheres 258.3
2795 Female, age 91, both hemispheres 245.8
Motor hypoglossal nucleus
nTPM: 268.9
2132 Female, age 85, both hemispheres 289.0
2461 Male, age 61, both hemispheres 275.5
2125 Female, age 91, both hemispheres 274.5
2277 Male, age 76, both hemispheres 257.9
2182 Male, age 80, both hemispheres 247.8
Motor trigeminal nucleus
nTPM: 256.2
2309 Male, age 76, both hemispheres 268.5
2335 Male, age 61, both hemispheres 263.9
2079 Male, age 80, both hemispheres 257.2
2560 Male, age 74, both hemispheres 249.6
2321 Female, age 91, both hemispheres 241.7
Nuclei of the trapezoid body
nTPM: 273.1
2159 Male, age 61, both hemispheres 299.8
2735 Female, age 85, both hemispheres 294.3
1983 Male, age 76, both hemispheres 277.5
2166 Male, age 80, both hemispheres 252.5
2368 Female, age 91, both hemispheres 241.4
Nucleus ambiguus
nTPM: 261.5
2096 Female, age 85, both hemispheres 284.7
2071 Male, age 76, both hemispheres 238.4
Nucleus cuneatus
nTPM: 240.6
2562 Male, age 61, both hemispheres 261.8
2564 Male, age 74, both hemispheres 255.6
2100 Male, age 76, both hemispheres 243.3
2805 Female, age 91, both hemispheres 229.9
2808 Female, age 85, both hemispheres 229.5
2380 Male, age 80, both hemispheres 223.4
Nucleus gracilis
nTPM: 229.7
2627 Male, age 74, both hemispheres 254.5
2382 Male, age 80, both hemispheres 220.9
2299 Female, age 85, both hemispheres 213.6
Nucleus raphe magnus
nTPM: 276.5
2160 Male, age 61, both hemispheres 319.9
2172 Female, age 85, both hemispheres 298.6
2455 Male, age 74, both hemispheres 282.9
2328 Male, age 80, both hemispheres 256.7
2051 Male, age 76, both hemispheres 256.4
2459 Female, age 91, both hemispheres 244.3
Nucleus raphe obscurus
nTPM: 238.5
2800 Male, age 61, midline 254.4
2845 Female, age 85, midline 244.3
2142 Male, age 76, midline 216.9
Nucleus raphe pallidus
nTPM: 241.5
2183 Male, age 80, midline 260.1
2145 Male, age 76, midline 233.8
1924 Male, age 61, midline 230.7
Nucleus tractus solitarii
nTPM: 255.8
2656 Male, age 76, both hemispheres 273.4
2144 Female, age 91, right hemisphere 264.9
2191 Female, age 85, both hemispheres 244.7
2307 Male, age 80, both hemispheres 240.2
Paramedian reticular nucleus
nTPM: 274.7
2050 Female, age 85, both hemispheres 287.6
2313 Male, age 61, both hemispheres 276.9
2057 Male, age 80, both hemispheres 276.5
2052 Male, age 76, both hemispheres 257.8
Parvicellular reticular nuclei
nTPM: 254.8
2095 Male, age 76, both hemispheres 260.4
2119 Male, age 80, both hemispheres 258.7
2558 Male, age 74, both hemispheres 245.2
Parvicellular reticular nuclei, medullary
nTPM: 282.0
2181 Male, age 80, left hemisphere 289.5
2189 Female, age 91, both hemispheres 281.6
2091 Female, age 85, both hemispheres 275.0
Peritrigeminal nucleus
nTPM: 264.8
2179 Male, age 61, both hemispheres 272.6
2136 Male, age 76, both hemispheres 262.1
2067 Female, age 85, both hemispheres 259.7
Pontine nuclei
nTPM: 272.3
2787 Female, age 85, both hemispheres 312.7
2727 Male, age 61, right hemisphere 300.8
1863 Male, age 55, unknown 291.4
2109 Female, age 72, unknown 271.6
1968 Male, age 76, left hemisphere 265.9
2454 Male, age 74, left hemisphere 252.6
2115 Male, age 80, left hemisphere 241.6
2319 Female, age 91, both hemispheres 241.6
Pontine raphe nucleus
nTPM: 283.6
2122 Female, age 85, midline 287.2
2853 Male, age 76, midline 279.9
Posteroventral cochlear nucleus
nTPM: 255.0
2752 Female, age 85, both hemispheres 296.4
2070 Male, age 76, both hemispheres 263.3
2371 Male, age 61, both hemispheres 249.4
2341 Male, age 80, both hemispheres 237.5
2135 Female, age 91, both hemispheres 228.7
Prepositus hypoglossal nucleus
nTPM: 266.2
2855 Female, age 85, right hemisphere 278.7
2086 Male, age 80, both hemispheres 253.7
Principal sensory trigeminal nucleus
nTPM: 270.8
2158 Male, age 61, both hemispheres 298.8
2008 Male, age 80, left hemisphere 273.2
2324 Male, age 76, both hemispheres 268.0
2367 Female, age 91, left hemisphere 243.1
Reticular pontine nucleus, caudal
nTPM: 252.7
2332 Male, age 80, right hemisphere 261.4
2092 Male, age 76, both hemispheres 261.3
2559 Male, age 74, both hemispheres 250.9
2457 Female, age 91, both hemispheres 237.3
Reticular pontine nucleus, oral
nTPM: 263.6
2012 Female, age 85, both hemispheres 278.4
2167 Male, age 76, both hemispheres 275.0
1939 Male, age 80, both hemispheres 270.1
2361 Male, age 74, both hemispheres 251.8
2366 Female, age 91, both hemispheres 242.6
Reticulotegmental nucleus
nTPM: 261.8
2325 Male, age 76, both hemispheres 277.7
2333 Male, age 80, both hemispheres 261.0
2322 Female, age 91, both hemispheres 260.1
2452 Male, age 74, both hemispheres 248.5
Spinal trigeminal nucleus, caudal
nTPM: 264.7
2390 Female, age 91, both hemispheres 292.2
2447 Male, age 76, both hemispheres 268.7
2642 Male, age 74, both hemispheres 255.1
2308 Male, age 80, both hemispheres 254.2
2312 Male, age 61, both hemispheres 253.5
Spinal trigeminal nucleus, interpolar
nTPM: 290.3
2625 Male, age 61, both hemispheres 311.4
2386 Female, age 85, both hemispheres 297.8
2066 Male, age 76, right hemisphere 289.4
2033 Male, age 80, both hemispheres 284.2
2389 Female, age 91, both hemispheres 268.8
Spinal trigeminal nucleus, oral
nTPM: 280.6
1978 Male, age 76, both hemispheres 292.5
2737 Female, age 85, both hemispheres 287.4
2164 Male, age 80, both hemispheres 262.0
Spinal vestibular nucleus
nTPM: 275.8
2186 Female, age 91, both hemispheres 290.4
2780 Male, age 80, both hemispheres 285.8
2806 Female, age 85, both hemispheres 285.6
2796 Male, age 61, both hemispheres 272.9
2748 Male, age 76, both hemispheres 269.2
2384 Male, age 74, both hemispheres 250.8
Subcoeruleus area
nTPM: 270.3
2323 Female, age 91, left hemisphere 291.3
1958 Male, age 80, both hemispheres 278.5
2451 Male, age 74, both hemispheres 263.6
2089 Male, age 76, left hemisphere 260.5
2369 Female, age 85, left hemisphere 257.9
Superior olive
nTPM: 263.3
1875 Female, age 85, both hemispheres 295.6
2364 Male, age 74, right hemisphere 263.0
2020 Male, age 76, both hemispheres 257.3
2329 Male, age 80, right hemisphere 251.9
2561 Female, age 91, both hemispheres 248.8
Superior vestibular nucleus
nTPM: 263.1
2383 Male, age 74, both hemispheres 267.5
2015 Male, age 80, both hemispheres 266.5
2061 Male, age 76, both hemispheres 255.4
Ventral medullary reticular nucleus
nTPM: 258.6
2060 Male, age 76, both hemispheres 271.4
2372 Male, age 61, both hemispheres 245.8
Ventral periolivary nuclei
nTPM: 264.4
2130 Female, age 85, both hemispheres 282.1
2165 Male, age 80, both hemispheres 268.9
2023 Male, age 76, both hemispheres 253.4
2794 Female, age 91, left hemisphere 253.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 256.3
2741 Female, age 85, both hemispheres 275.2
1986 Male, age 76, both hemispheres 268.8
2180 Male, age 61, both hemispheres 253.8
2302 Female, age 91, both hemispheres 251.4
2118 Male, age 80, both hemispheres 232.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 255.9
2840 Female, age 85, both hemispheres 277.6
2449 Male, age 74, both hemispheres 262.8
1959 Male, age 76, both hemispheres 262.4
2359 Male, age 61, both hemispheres 250.4
2161 Male, age 80, both hemispheres 248.7
2456 Female, age 91, both hemispheres 233.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 410.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 189.4
FF:10165-103B3 76 years, female 190.5
FF:10182-103D2 60 years, female 188.3
Medulla oblongata
Scaled Tags Per Million: 214.5
FF:10038-101F2 18-64 years, mixed 271.9
FF:10174-103C3 60 years, female 196.7
FF:10155-103A2 76 years, female 174.9
Pons
Scaled Tags Per Million: 410.1
FF:10033-101E6 18-54 years, mixed 410.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 607.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 607.7
Samples: 4

Max nTPM: 624.2
Min nTPM: 590.3
Sample A Male 609.2
Sample B Male 607.0
Sample C Female 624.2
Sample D Female 590.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.8
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 6.8
Pons
Expression energy: 8.7
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 8.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.