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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:217.9 nTPM
HPA:217.9 nTPM
GTEx:302.9 nTPM
FANTOM5:447.7 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 217.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 208.3
2565 Male, age 75, midline 213.3
1981 Female, age 72, midline 213.1
2048 Male, age 55, midline 209.2
2194 Female, age 79, both hemispheres 204.9
2816 Male, age 47, midline 201.0
Cervical spinal cord, dorsal horn
nTPM: 211.2
2296 Male, age 66, both hemispheres 219.2
2069 Male, age 47, both hemispheres 218.4
2173 Female, age 72, unknown 216.6
1877 Male, age 55, unknown 208.7
2297 Male, age 75, both hemispheres 207.7
2721 Male, age 90, both hemispheres 196.7
Cervical spinal cord, ventral horn
nTPM: 217.9
2480 Male, age 75, both hemispheres 237.4
2809 Male, age 90, both hemispheres 228.0
2068 Male, age 55, unknown 216.2
2098 Female, age 72, unknown 214.8
2295 Male, age 66, both hemispheres 210.7
2820 Female, age 79, both hemispheres 200.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 302.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 302.9
Samples: 159

Max nTPM: 608.8
Min nTPM: 104.6
Std nTPM: 98.0
Median nTPM: 285.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 608.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 600.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 571.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 570.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 502.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 499.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 495.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 493.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 485.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 484.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 469.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 462.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 462.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 456.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 453.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 453.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 451.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 437.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 433.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 428.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 421.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 420.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 416.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 408.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 394.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 394.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 391.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 390.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 389.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 387.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 387.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 385.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 384.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 374.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 373.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 370.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 369.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 368.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 367.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 360.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 354.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 354.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 353.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 352.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 352.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 351.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 350.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 347.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 343.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 338.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 335.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 333.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 330.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 327.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 326.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 326.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 324.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 322.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 322.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 322.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 321.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 319.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 312.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 310.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 308.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 305.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 303.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 303.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 303.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 301.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 295.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 295.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 295.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 293.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 291.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 290.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 288.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 288.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 288.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 285.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 285.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 284.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 283.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 283.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 281.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 281.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 281.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 277.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 275.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 272.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 263.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 262.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 261.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 257.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 255.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 253.9
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 253.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 253.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 250.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 250.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 248.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 247.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 247.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 246.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 245.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 245.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 244.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 243.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 242.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 242.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 240.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 240.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 239.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 239.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 235.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 235.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 234.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 234.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 233.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 232.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 231.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 229.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 225.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 224.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 222.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 221.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 221.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 220.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 219.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 219.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 218.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 216.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 215.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 214.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 210.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 210.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 207.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 206.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 203.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 203.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 197.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 194.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 192.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 190.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 187.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 185.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 183.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 183.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 182.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 178.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 176.8
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 173.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 170.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 165.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 159.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 155.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 152.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 148.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 104.6
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 447.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 447.7
FF:10181-103D1 60 years, female 472.2
FF:10159-103A6 76 years, female 423.2

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