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EIF4A2
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:310.3 nTPM
GTEx:310.3 nTPM
FANTOM5:378.2 Scaled Tags Per Million
Pig:214.8 nTPM
Mouse:451.8 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 310.3
GTEx sample id Sample description nTPM
Retina
Average nTPM: 310.3
Samples: 105

Max nTPM: 722.6
Min nTPM: 158.0
Std nTPM: 92.4
Median nTPM:
491_1 89 years, female 722.6
99_1 64 years, male 538.4
490_1 67 years, female 516.8
119_1 70 years, female 516.6
120_1 70 years, female 477.4
42_1 85 years, male 469.4
347_1 72 years, male 461.5
315_1 62 years, female 452.7
413_1 59 years, female 441.4
162_1 79 years, female 435.4
89_1 63 years, male 434.2
32_1 67 years, male 423.9
142_1 61 years, female 419.0
41_1 94 years, female 416.2
447_1 81 years, male 415.3
145_1 84 years, male 404.3
173_1 67 years, male 401.9
314_1 67 years, male 401.8
379_1 60 years, male 399.5
109_1 81 years, female 395.2
117_1 61 years, male 394.1
324_1 76 years, male 382.6
452_1 88 years, female 358.0
384_1 83 years, male 356.7
317_1 60 years, male 354.6
501_1 88 years, male 353.1
415_1 77 years, female 351.7
115_1 83 years, male 351.3
149_1 88 years, male 346.3
396_1 62 years, male 345.4
6_1 73 years, female 344.2
139_1 64 years, female 340.3
386_1 76 years, male 340.1
414_1 84 years, female 331.3
229_1 69 years, female 330.4
355_1 70 years, female 330.4
35_1 74 years, female 329.6
265_1 87 years, male 327.6
375_1 74 years, female 325.6
307_1 66 years, female 325.1
506_1 65 years, male 318.9
348_1 84 years, male 318.1
81_1 67 years, male 317.8
43_1 64 years, female 316.2
4_1 88 years, female 313.3
17_1 71 years, male 307.3
9_1 66 years, female 306.0
137_1 83 years, male 300.4
349_1 83 years, male 300.2
308_1 70 years, female 297.7
153_1 70 years, female 297.2
243_1 75 years, male 297.1
321_1 62 years, female 295.0
288_1 66 years, female 292.3
466_1 57 years, female 291.9
311_1 78 years, male 291.8
404_1 82 years, female 291.7
266_1 85 years, male 290.7
218_1 71 years, female 289.5
18_1 88 years, male 288.9
313_1 79 years, female 286.1
351_1 91 years, male 284.7
291_1 76 years, male 283.9
177_1 74 years, male 283.1
237_1 82 years, male 275.1
254_1 77 years, female 275.1
468_1 89 years, male 274.9
295_1 61 years, female 273.1
350_1 84 years, female 267.4
172_1 72 years, female 266.4
217_1 76 years, male 262.8
499_1 55 years, female 261.9
126_1 63 years, male 258.1
246_1 77 years, male 257.9
353_1 82 years, female 252.7
518_1 75 years, female 252.0
352_1 62 years, male 251.1
354_1 81 years, female 249.0
335_1 73 years, female 248.7
264_1 73 years, female 248.0
356_1 87 years, female 244.0
2_1 77 years, female 243.7
526_1 61 years, male 239.7
389_1 86 years, female 238.2
316_1 62 years, male 237.6
322_1 76 years, male 225.9
189_1 76 years, male 218.2
503_1 68 years, male 218.0
376_1 75 years, female 217.7
480_1 63 years, male 214.6
517_1 88 years, male 214.0
495_1 57 years, female 212.0
292_1 71 years, male 210.3
377_1 82 years, female 208.6
318_1 68 years, male 208.3
394_1 75 years, female 200.3
286_1 68 years, female 198.4
425_1 59 years, female 196.2
319_1 81 years, male 192.7
405_1 91 years, male 190.3
320_1 89 years, female 180.6
406_1 79 years, male 179.1
251_1 78 years, male 173.3
293_1 68 years, female 162.2
163_1 78 years, male 158.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 378.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 378.2
FF:10030-101E3 24-65 years, mixed 378.2

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 214.8
Pig sample Sample description nTPM
Retina
nTPM: 214.8
Samples: 4

Max nTPM: 242.7
Min nTPM: 201.6
Sample A Female 201.6
Sample B Female 242.7
Sample C Male 202.1
Sample D Male 212.8

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 451.8
Mouse sample Sample description nTPM
Retina
nTPM: 451.8
Samples: 4

Max nTPM: 521.3
Min nTPM: 374.8
Sample A Male 504.4
Sample B Male 406.6
Sample C Female 374.8
Sample D Female 521.3

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