HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.2 nTPM
HPA:46.2 nTPM
GTEx:120.4 nTPM
FANTOM5:84.5 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:31.1 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030514
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.3
2529 Female, age 94, left hemisphere 44.2
1898 Male, age 80, left hemisphere 44.1
2621 Female, age 67, right hemisphere 44.1
1855 Male, age 76, left hemisphere 42.8
2148 Female, age 91, left hemisphere 42.6
1911 Female, age 85, right hemisphere 41.8
Dentate gyrus
nTPM: 43.2
2530 Female, age 94, left hemisphere 47.2
2531 Female, age 67, both hemispheres 43.7
2010 Male, age 76, both hemispheres 43.0
2246 Female, age 85, both hemispheres 42.5
1927 Female, age 91, both hemispheres 42.3
2528 Male, age 74, both hemispheres 40.4
Entorhinal gyrus
nTPM: 46.2
2686 Male, age 75, right hemisphere 50.4
2764 Male, age 80, right hemisphere 47.2
2613 Female, age 94, left hemisphere 45.8
1938 Female, age 85, left hemisphere 45.0
2117 Female, age 91, right hemisphere 44.7
1787 Male, age 76, left hemisphere 44.3
Hippocampus, CA1
nTPM: 43.2
2749 Male, age 80, left hemisphere 46.6
2045 Male, age 76, both hemispheres 43.2
2082 Female, age 91, right hemisphere 42.4
1873 Female, age 85, both hemispheres 42.0
2527 Male, age 74, both hemispheres 41.5
Hippocampus, CA2
nTPM: 43.0
1892 Male, age 76, both hemispheres 44.8
1963 Male, age 80, left hemisphere 44.2
2437 Female, age 94, left hemisphere 43.8
1940 Female, age 85, left hemisphere 42.4
2113 Female, age 91, right hemisphere 42.0
2249 Male, age 74, both hemispheres 40.5
Hippocampus, CA3
nTPM: 43.3
2137 Male, age 80, left hemisphere 45.4
2620 Female, age 94, left hemisphere 44.3
1867 Male, age 76, both hemispheres 44.2
2861 Female, age 67, both hemispheres 43.9
1891 Female, age 85, both hemispheres 42.8
2436 Male, age 74, both hemispheres 39.3
Parahippocampal cortex
nTPM: 44.3
1850 Male, age 80, both hemispheres 46.1
2622 Female, age 67, right hemisphere 45.9
2532 Female, age 72, left hemisphere 45.3
2245 Female, age 91, both hemispheres 45.0
2692 Male, age 74, both hemispheres 44.9
1933 Female, age 85, both hemispheres 43.8
1990 Female, age 91, right hemisphere 43.7
2018 Male, age 76, both hemispheres 43.6
2693 Female, age 94, both hemispheres 42.8
2250 Female, age 67, right hemisphere 41.4
Perirhinal gyrus
nTPM: 45.1
2848 Male, age 76, right hemisphere 46.9
1794 Male, age 80, right hemisphere 46.1
1847 Female, age 91, left hemisphere 45.2
1841 Female, age 85, right hemisphere 45.1
2521 Female, age 94, right hemisphere 42.3
Subiculum
nTPM: 43.5
1901 Male, age 80, both hemispheres 45.1
1977 Female, age 85, both hemispheres 44.6
2042 Male, age 76, both hemispheres 44.2
2438 Female, age 94, left hemisphere 42.9
2619 Male, age 74, both hemispheres 42.6
2729 Female, age 91, right hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 120.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.4
Samples: 197

Max nTPM: 303.9
Min nTPM: 52.0
Std nTPM: 35.1
Median nTPM: 112.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 303.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 259.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 220.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 219.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 209.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 200.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 198.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 198.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 194.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 190.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 186.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.5
FF:10153-102I9 76 years, female 89.6
FF:10169-103B7 60 years, female 79.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 24.8
Min nTPM: 14.7
Sample A Female 24.8
Sample B Female 19.9
Sample C Male 19.3
Sample D Male 14.7
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 25.7
Min nTPM: 18.0
Sample A Female 21.4
Sample B Female 25.7
Sample C Male 20.6
Sample D Male 18.0
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 27.3
Min nTPM: 16.3
Sample A Female 27.3
Sample B Female 17.7
Sample C Male 17.5
Sample D Male 16.3
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.7
Sample A Female 18.7
Sample B Female 14.7
Sample C Male 20.2
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.1
Samples: 4

Max nTPM: 33.9
Min nTPM: 29.4
Sample A Male 29.6
Sample B Male 29.4
Sample C Female 31.4
Sample D Female 33.9
Hippocampal formation
nTPM: 27.9
Samples: 4

Max nTPM: 32.5
Min nTPM: 25.3
Sample A Male 32.5
Sample B Male 25.3
Sample C Female 27.7
Sample D Female 26.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69113632 Antisense, RP_050316_02_E01, Mouse strain C57BL/6J (56 days, male) 2.7

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