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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:469.1 nTPM
GTEx:469.1 nTPM
FANTOM5:324.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045617
Squamous epithelial cells Medium


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 469.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 469.1
Samples: 156

Max nTPM: 2559.4
Min nTPM: 81.9
Std nTPM: 449.0
Median nTPM: 309.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 2559.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 2192.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 2106.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1864.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1716.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1699.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1551.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1549.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1485.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1372.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1325.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1301.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1252.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1216.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1215.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1029.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1026.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 890.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 849.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 826.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 822.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 806.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 781.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 748.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 747.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 741.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 732.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 728.7
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 726.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 715.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 699.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 682.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 661.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 644.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 637.8
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 613.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 605.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 596.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 590.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 571.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 552.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 550.9
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 533.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 529.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 521.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 504.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 503.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 501.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 478.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 476.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 457.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 439.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 437.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 424.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 420.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 418.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 413.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 407.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 404.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 397.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 396.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 395.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 394.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 393.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 380.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 380.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 375.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 369.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 358.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 358.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 346.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 346.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 344.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 343.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 335.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 335.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 329.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 315.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 304.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 304.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 299.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 296.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 295.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 294.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 291.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 286.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 283.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 272.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 268.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 257.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 256.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 251.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 250.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 249.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 247.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 246.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 240.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 233.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 233.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 232.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 227.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 225.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 224.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 220.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 220.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 215.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 210.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 207.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 204.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 199.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 198.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 197.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 191.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 190.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 185.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 180.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 176.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 172.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 172.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 170.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 169.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 167.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 166.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 162.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 155.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 154.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 154.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 150.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 147.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 146.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 142.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 141.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 135.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 131.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 131.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 128.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 127.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 127.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 122.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 121.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 119.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 119.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 117.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 112.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 111.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 110.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 106.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 102.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 102.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 101.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 98.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 95.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 95.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 93.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 81.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 81.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 324.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 324.9
FF:10204-103F6 68 years, female 324.9

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