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CSRP1
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:503.6 nTPM
HPA:184.6 nTPM
GTEx:503.6 nTPM
FANTOM5:638.4 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045617
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 184.6
overview
Male, age 65
Small intestine sample 232
nTPM: 91.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 205.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 224.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 216.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 503.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 503.6
Samples: 187

Max nTPM: 4383.0
Min nTPM: 67.2
Std nTPM: 701.9
Median nTPM: 186.8
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 4383.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 2917.2
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2872.2
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2625.8
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 2599.0
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 2463.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2441.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2414.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 2215.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 2201.1
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 2090.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1984.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1963.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1852.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1830.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1721.6
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1637.6
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1615.3
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1583.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1552.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1488.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1464.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1456.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1411.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1344.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1161.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1126.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1102.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1102.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1040.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1040.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 947.4
GTEX-1192X-2526-SM-59868 50-59 years, male 879.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 857.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 856.0
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 769.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 752.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 712.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 704.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 657.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 630.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 532.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 525.8
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 518.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 504.6
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 457.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 427.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 424.0
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 383.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 374.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 370.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 365.9
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 350.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 348.7
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 345.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 335.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 325.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 324.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 314.4
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 311.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 293.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 285.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 281.9
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 280.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 279.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 270.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 269.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 253.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 250.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 246.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 243.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 227.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 225.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 224.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 217.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 217.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 215.2
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 213.8
GTEX-YFCO-1326-SM-664NV 40-49 years, male 213.0
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 208.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 207.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 204.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 202.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 200.4
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 197.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 197.8
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 195.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 194.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 194.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 193.8
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 193.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 192.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 189.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 186.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 185.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 184.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 183.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 183.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 177.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 176.2
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 172.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 168.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 168.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 166.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 166.0
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 165.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 165.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 164.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 163.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 161.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 161.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 160.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 159.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 159.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 159.3
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 158.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 157.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 157.2
GTEX-13113-1226-SM-5EGHT 60-69 years, female 156.3
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 154.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 153.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 153.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 152.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 148.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 148.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 147.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 146.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 145.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 144.1
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 144.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 143.7
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 143.5
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 143.0
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 139.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 139.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 137.6
GTEX-ZTSS-0926-SM-59865 40-49 years, male 135.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 135.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 135.5
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 135.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 134.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 133.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 133.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 132.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 132.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 130.7
GTEX-14PN3-2026-SM-68729 60-69 years, female 129.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 127.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 126.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 125.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 124.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 124.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 124.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 124.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 123.2
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 123.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 122.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 122.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 121.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 120.7
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 120.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 120.0
GTEX-144GM-1026-SM-79OKU 20-29 years, male 118.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 116.5
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 116.2
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 115.4
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 115.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 114.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 109.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 108.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 105.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 103.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 103.4
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 102.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 100.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 99.0
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 99.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 99.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 98.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 97.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 96.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 91.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 90.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 89.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 85.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 72.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 67.2
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 638.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 638.4
FF:10024-101D6 15,40,85 years, mixed 638.4

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