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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:58.6 nTPM
HPA:58.6 nTPM
GTEx:42.7 nTPM
FANTOM5:342.0 Scaled Tags Per Million
Pig:103.4 nTPM
Mouse:79.1 nTPM
Allen mouse:2.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001471Antibody CAB009828
Glial cells Not detectedMedium
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 58.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 54.1
1781 Male, age 74, unknown 67.7
2846 Female, age 79, unknown 65.1
2289 Male, age 61, right hemisphere 59.2
2481 Female, age 94, left hemisphere 58.7
1857 Female, age 85, left hemisphere 56.7
1854 Male, age 80, left hemisphere 48.6
2290 Female, age 72, unknown 44.4
2288 Male, age 75, left hemisphere 32.7
Claustrum
nTPM: 39.8
2292 Female, age 85, both hemispheres 52.7
2196 Female, age 79, unknown 51.1
2198 Male, age 80, both hemispheres 48.2
1956 Male, age 74, unknown 38.9
2284 Female, age 91, both hemispheres 35.6
2392 Female, age 94, both hemispheres 35.1
2645 Female, age 72, unknown 34.7
2491 Male, age 75, both hemispheres 33.8
2568 Male, age 61, both hemispheres 27.9
Globus pallidus, externus
nTPM: 58.6
2395 Male, age 75, both hemispheres 90.1
1996 Male, age 80, right hemisphere 66.8
2772 Female, age 79, unknown 61.5
2567 Female, age 72, unknown 42.7
2646 Male, age 61, right hemisphere 31.8
Globus pallidus, internus
nTPM: 54.8
2037 Male, age 80, right hemisphere 67.9
2566 Female, age 72, unknown 61.2
2778 Female, age 91, both hemispheres 60.2
1818 Male, age 74, unknown 57.5
2111 Female, age 85, right hemisphere 53.7
2483 Female, age 94, right hemisphere 48.4
2287 Male, age 75, right hemisphere 34.7
Nucleus accumbens
nTPM: 47.9
2732 Male, age 80, right hemisphere 57.1
2698 Female, age 72, unknown 56.9
1856 Female, age 91, right hemisphere 52.6
2391 Female, age 94, left hemisphere 52.6
1806 Female, age 85, left hemisphere 51.3
1783 Male, age 74, unknown 48.9
2286 Male, age 75, left hemisphere 35.2
2824 Male, age 61, right hemisphere 28.8
Nucleus basalis of Meynert
nTPM: 47.6
2821 Male, age 75, both hemispheres 59.1
2393 Male, age 80, right hemisphere 52.0
2484 Female, age 94, left hemisphere 47.3
2569 Male, age 61, both hemispheres 32.0
Nucleus of the diagonal band
nTPM: 44.3
1812 Female, age 91, both hemispheres 56.9
2775 Male, age 80, right hemisphere 44.9
1979 Male, age 74, unknown 43.2
2029 Male, age 61, right hemisphere 40.1
2195 Female, age 85, both hemispheres 36.5
Olfactory tubercle
nTPM: 42.6
2487 Female, age 94, left hemisphere 49.8
1846 Male, age 80, right hemisphere 45.7
2856 Male, age 75, right hemisphere 38.7
1998 Female, age 91, both hemispheres 36.2
Putamen
nTPM: 52.6
2482 Female, age 94, left hemisphere 98.8
2489 Female, age 72, unknown 54.4
1937 Female, age 91, right hemisphere 51.6
2466 Female, age 79, unknown 48.2
1829 Male, age 74, unknown 46.0
1838 Male, age 80, right hemisphere 39.4
2647 Male, age 75, left hemisphere 30.0
Septal nuclei
nTPM: 50.5
2394 Male, age 61, left hemisphere 63.7
2199 Male, age 80, right hemisphere 61.9
2009 Female, age 91, both hemispheres 49.9
2629 Female, age 94, right hemisphere 49.7
2059 Female, age 85, both hemispheres 43.4
2031 Female, age 72, unknown 42.6
1960 Male, age 74, unknown 42.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 42.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.7
Samples: 246

Max nTPM: 274.8
Min nTPM: 2.9
Std nTPM: 43.7
Median nTPM: 27.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 274.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 212.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 201.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 198.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 195.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 177.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 168.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 156.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 152.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 151.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 144.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 144.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 136.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 136.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 135.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 133.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 124.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 117.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 116.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 113.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 108.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 104.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 103.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 102.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 100.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 99.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 93.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 92.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 88.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 87.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 85.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 85.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 83.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 81.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 80.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 79.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 68.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 67.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 67.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 66.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 65.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 62.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 61.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 54.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 52.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 52.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 52.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 51.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 50.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 48.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 48.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 48.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 47.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 45.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 45.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 45.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 43.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 42.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 42.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 41.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 40.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 40.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 40.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 39.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 39.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 39.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 38.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 37.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 36.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 36.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 36.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 35.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 34.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 34.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 34.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 34.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 33.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 32.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 32.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 32.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 31.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 31.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 31.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 31.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 31.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 31.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 30.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 30.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 30.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 30.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 30.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 28.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 27.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 27.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 26.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 26.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 26.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 26.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 25.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 25.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 24.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 24.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 24.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 24.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 23.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 23.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 23.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 23.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 23.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 22.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 22.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 22.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 22.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 22.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 21.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 21.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 21.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 21.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 21.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 21.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 21.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 20.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 20.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 20.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 20.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 20.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 20.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 19.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 19.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 19.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 19.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 19.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 18.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 18.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 18.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 17.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 17.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 17.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 17.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 17.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 17.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 17.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 17.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 17.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 16.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 16.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 16.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 16.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 15.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 15.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 15.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 15.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 15.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 14.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 14.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 14.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 13.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 13.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 13.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 13.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 12.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 12.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 12.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 12.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 11.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 11.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 11.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 10.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 10.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 10.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 10.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 10.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 9.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 9.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 9.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 9.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 9.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 8.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 8.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 8.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 8.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 8.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 8.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 8.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 8.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 7.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 6.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 6.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 6.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 6.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 6.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 6.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 6.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 5.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 5.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 5.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 5.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 5.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 37.8
Samples: 246

Max nTPM: 319.9
Min nTPM: 2.1
Std nTPM: 46.3
Median nTPM: 19.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 319.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 280.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 227.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 182.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 178.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 167.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 167.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 165.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 164.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 162.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 150.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 148.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 146.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 131.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 122.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 121.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 117.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 117.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 113.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 106.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 104.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 103.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 92.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 91.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 90.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 88.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 87.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 84.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 84.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 82.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 81.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 77.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 75.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 73.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 71.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 71.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 71.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 69.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 66.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 65.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 64.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 60.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 60.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 59.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 57.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 56.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 55.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 54.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 53.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 53.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 52.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 51.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 47.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 47.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 46.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 46.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 44.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 44.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 43.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 41.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 41.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 41.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 41.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 41.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 40.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 39.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 37.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 37.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 37.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 37.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 36.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 36.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 36.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 35.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 35.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 35.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 35.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 34.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 33.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 32.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 32.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 32.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 32.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 31.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 29.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 29.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 29.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 28.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 28.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 28.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 27.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 27.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 27.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 27.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 27.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 26.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 25.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 25.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 25.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 25.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 24.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 24.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 24.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 23.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 23.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 22.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 22.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 22.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 21.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 21.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 20.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 20.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 19.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 19.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 19.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 19.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 18.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 18.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 18.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 18.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 18.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 17.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 17.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 17.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 17.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 16.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 16.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 16.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 16.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 16.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 16.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 16.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 15.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 15.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 15.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 15.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 14.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 14.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 14.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 14.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 14.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 14.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 14.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 14.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 14.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 14.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 14.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 13.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 13.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 13.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 13.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 13.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 13.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 13.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 12.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 12.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 12.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 12.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 12.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 11.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 11.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 11.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 11.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 11.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 11.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 11.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 10.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 10.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 10.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 10.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 10.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 10.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 10.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 10.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 10.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 10.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 10.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 10.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 9.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 9.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 9.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 9.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 9.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 9.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 9.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 8.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 8.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 8.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 8.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 8.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 8.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 8.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 7.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 7.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 7.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 7.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 7.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 7.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 6.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 6.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 6.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 6.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 6.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 6.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 6.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 6.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 6.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 5.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 5.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 5.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 5.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 5.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 5.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 5.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 4.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 4.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 4.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 3.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 3.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 2.1
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Brain - Putamen (basal ganglia)
Average nTPM: 35.7
Samples: 205

Max nTPM: 250.4
Min nTPM: 2.7
Std nTPM: 37.4
Median nTPM: 23.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 250.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 222.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 174.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 159.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 155.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 153.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 144.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 119.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 118.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 115.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 113.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 102.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 93.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 92.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 91.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 88.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 85.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 85.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 84.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 82.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 80.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 78.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 71.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 71.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 71.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 69.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 65.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 64.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 64.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 64.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 64.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 61.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 60.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 58.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 58.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 55.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 54.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 52.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 51.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 50.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 50.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 49.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 48.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 48.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 47.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 44.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 44.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 43.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 43.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 42.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 42.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 42.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 39.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 38.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 38.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 37.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 37.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 37.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 36.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 36.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 35.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 35.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 34.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 33.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 32.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 31.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 31.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 30.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 30.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 29.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 29.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 29.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 29.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 28.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 28.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 28.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 28.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 27.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 26.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 26.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 26.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 25.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 25.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 25.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 25.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 24.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 24.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 24.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 24.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 23.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 23.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 23.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 23.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 22.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 22.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 22.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 21.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 21.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 21.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 21.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 21.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 21.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 21.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 20.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 19.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 19.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 19.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 19.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 19.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 19.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 19.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 19.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 18.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 18.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 17.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 17.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 17.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 17.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 16.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 16.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 16.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 16.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 16.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 16.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 16.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 15.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 15.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 15.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 15.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 15.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 15.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 15.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 14.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 14.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 14.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 13.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 13.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 13.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 13.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 13.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 13.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 13.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 12.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 12.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 12.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 12.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 12.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 11.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 10.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 10.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 10.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 9.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 8.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 8.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 7.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 7.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 6.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 6.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 6.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 6.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 6.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 5.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 5.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 5.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 4.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 4.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 4.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 4.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 342.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 322.8
FF:10164-103B2 76 years, female 322.8
Globus pallidus
Scaled Tags Per Million: 342.0
FF:10161-103A8 76 years, female 521.4
FF:10175-103C4 60 years, female 162.6
Nucleus accumbens
Scaled Tags Per Million: 88.6
FF:10037-101F1 23-56 years, mixed 88.6
Putamen
Scaled Tags Per Million: 101.4
FF:10176-103C5 60 years, female 101.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 103.4
Pig sample Sample description nTPM
Caudate
nTPM: 48.9
Samples: 4

Max nTPM: 57.7
Min nTPM: 38.6
Sample A Female 52.9
Sample B Female 57.7
Sample C Male 46.4
Sample D Male 38.6
Putamen
nTPM: 52.9
Samples: 4

Max nTPM: 67.8
Min nTPM: 46.3
Sample A Female 67.8
Sample B Female 50.0
Sample C Male 47.3
Sample D Male 46.3
Septum
nTPM: 103.4
Samples: 4

Max nTPM: 134.6
Min nTPM: 78.0
Sample A Female 112.7
Sample B Female 78.0
Sample C Male 134.6
Sample D Male 88.2
Ventral pallidum
nTPM: 56.5
Samples: 4

Max nTPM: 66.1
Min nTPM: 48.6
Sample A Female 51.3
Sample B Female 60.0
Sample C Male 66.1
Sample D Male 48.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 79.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 78.8
Samples: 4

Max nTPM: 97.6
Min nTPM: 67.7
Sample A Male 71.7
Sample B Male 97.6
Sample C Female 67.7
Sample D Female 78.2
Septum
nTPM: 61.7
Samples: 4

Max nTPM: 67.7
Min nTPM: 54.9
Sample A Male 58.6
Sample B Male 65.6
Sample C Female 67.7
Sample D Female 54.9
Ventral forebrain
nTPM: 79.1
Samples: 4

Max nTPM: 103.6
Min nTPM: 62.1
Sample A Male 81.9
Sample B Male 68.9
Sample C Female 103.6
Sample D Female 62.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.0
70430916 Antisense, RP_050614_02_D02, Mouse strain C57BL/6J (56 days, male) 2.5
77340474 Antisense, RP_070116_02_C12, Mouse strain C57BL/6J (56 days, male) 1.6
Pallidum
Expression energy: 2.0
70430916 Antisense, RP_050614_02_D02, Mouse strain C57BL/6J (56 days, male) 2.5
77340474 Antisense, RP_070116_02_C12, Mouse strain C57BL/6J (56 days, male) 1.4

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