PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:175.6 nTPM
HPA:175.6 nTPM
FANTOM5:443.6 Scaled Tags Per Million
Pig:0.9 nTPM
Mouse:0.0 nTPM
Allen mouse:4.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 175.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 162.0
2188 Female, age 91, both hemispheres 187.0
2090 Male, age 80, both hemispheres 162.7
2301 Female, age 85, both hemispheres 159.2
1984 Male, age 76, both hemispheres 139.1
Area postrema
nTPM: 157.7
2306 Male, age 80, both hemispheres 175.4
2799 Male, age 61, both hemispheres 160.8
2054 Male, age 76, both hemispheres 136.8
Cuneate nuclei
nTPM: 153.3
2381 Male, age 80, both hemispheres 159.1
2131 Male, age 76, both hemispheres 150.7
2376 Male, age 61, both hemispheres 150.3
Dorsal cochlear nucleus
nTPM: 149.0
2058 Male, age 76, both hemispheres 155.4
2378 Male, age 80, both hemispheres 153.9
2187 Female, age 91, both hemispheres 153.7
2370 Male, age 61, both hemispheres 143.7
2802 Male, age 74, right hemisphere 138.5
Dorsal medullary reticular nucleus
nTPM: 154.4
2040 Female, age 85, both hemispheres 165.6
2088 Male, age 76, both hemispheres 151.9
2373 Male, age 61, both hemispheres 145.8
Dorsal motor vagal complex
nTPM: 141.3
2185 Male, age 76, both hemispheres 171.1
2000 Male, age 74, unknown 157.6
2133 Female, age 91, both hemispheres 147.0
2643 Male, age 74, both hemispheres 135.6
2813 Female, age 72, unknown 135.1
2844 Male, age 55, unknown 130.9
2807 Female, age 85, both hemispheres 130.3
2797 Male, age 61, both hemispheres 122.6
Dorsal tegmental nucleus
nTPM: 151.0
2083 Male, age 80, both hemispheres 171.7
2326 Male, age 74, both hemispheres 147.6
1936 Male, age 76, left hemisphere 142.3
2358 Male, age 61, both hemispheres 142.3
Dorsolateral tegmental area
nTPM: 155.6
2751 Female, age 85, both hemispheres 173.0
2337 Male, age 61, both hemispheres 166.6
2654 Male, age 80, both hemispheres 166.0
2360 Male, age 74, both hemispheres 139.1
2141 Male, age 76, both hemispheres 133.0
Gigantocellular reticular nuclei, medullary
nTPM: 164.0
1876 Female, age 85, both hemispheres 181.6
2314 Male, age 61, both hemispheres 170.6
2387 Female, age 91, both hemispheres 166.6
2022 Male, age 76, right hemisphere 165.7
2310 Male, age 80, both hemispheres 152.0
2462 Male, age 74, both hemispheres 147.3
Gigantocellular reticular nuclei, pars
nTPM: 156.1
2336 Male, age 61, both hemispheres 162.2
2330 Male, age 80, both hemispheres 158.3
2084 Female, age 85, both hemispheres 157.1
2706 Male, age 80, both hemispheres 155.3
2168 Male, age 76, both hemispheres 147.8
Inferior olive
nTPM: 166.3
2178 Male, age 61, both hemispheres 173.4
2085 Female, age 85, both hemispheres 171.4
2628 Female, age 91, both hemispheres 168.9
2563 Male, age 74, both hemispheres 167.1
2379 Male, age 80, both hemispheres 150.8
Kolliker-Fuse nucleus
nTPM: 167.7
2793 Female, age 91, left hemisphere 194.1
2163 Male, age 80, both hemispheres 156.7
2315 Male, age 76, right hemisphere 152.3
Lateral lemniscal nuclei
nTPM: 160.3
2320 Female, age 91, left hemisphere 173.6
2746 Female, age 85, left hemisphere 169.1
2169 Male, age 76, both hemispheres 158.8
2453 Male, age 74, right hemisphere 152.9
2036 Male, age 80, both hemispheres 146.8
Lateral medullary reticular nucleus
nTPM: 168.1
2305 Male, age 74, both hemispheres 183.0
2852 Male, age 80, both hemispheres 182.6
2374 Male, age 61, both hemispheres 169.6
2044 Male, age 76, both hemispheres 163.1
2190 Female, age 85, both hemispheres 162.8
2804 Female, age 91, both hemispheres 147.8
Lateral parabrachial nucleus
nTPM: 170.4
2792 Male, age 76, both hemispheres 206.5
2013 Male, age 80, both hemispheres 167.7
2139 Female, age 85, right hemisphere 157.1
2790 Male, age 61, both hemispheres 150.3
Lateral vestibular nucleus
nTPM: 156.8
2184 Male, age 76, both hemispheres 159.8
2311 Male, age 80, both hemispheres 153.8
Locus coeruleus
nTPM: 135.2
2317 Female, age 72, unknown 140.7
2162 Male, age 80, both hemispheres 137.6
2123 Female, age 91, both hemispheres 135.9
2720 Male, age 74, both hemispheres 135.6
2788 Male, age 74, unknown 135.0
2014 Male, age 55, unknown 134.3
1980 Male, age 76, both hemispheres 127.1
Medial olivary nucleus
nTPM: 175.6
1943 Male, age 61, both hemispheres 198.9
2138 Female, age 91, both hemispheres 175.2
2851 Male, age 80, both hemispheres 167.4
1962 Male, age 76, both hemispheres 160.9
Medial parabrachial nucleus
nTPM: 157.4
2463 Female, age 85, right hemisphere 168.1
2854 Male, age 80, both hemispheres 159.5
2170 Female, age 91, both hemispheres 157.9
2786 Male, age 76, both hemispheres 151.5
2156 Male, age 61, both hemispheres 150.1
Medial periolivary nuclei
nTPM: 163.2
2791 Male, age 74, right hemisphere 176.8
2081 Male, age 80, both hemispheres 174.8
2458 Female, age 91, both hemispheres 164.8
2063 Male, age 76, both hemispheres 156.8
2171 Female, age 85, both hemispheres 142.9
Medial vestibular nucleus
nTPM: 153.4
2803 Female, age 91, both hemispheres 166.2
2093 Male, age 80, both hemispheres 163.3
2801 Male, age 74, both hemispheres 156.2
2624 Male, age 61, both hemispheres 154.9
2743 Female, age 85, both hemispheres 144.5
2134 Male, age 76, both hemispheres 135.2
Motor facial nucleus
nTPM: 161.7
2365 Male, age 74, right hemisphere 179.7
2697 Female, age 85, both hemispheres 179.2
2126 Male, age 61, both hemispheres 162.4
2327 Male, age 80, both hemispheres 152.2
2062 Male, age 76, both hemispheres 150.4
2795 Female, age 91, both hemispheres 146.4
Motor hypoglossal nucleus
nTPM: 152.3
2132 Female, age 85, both hemispheres 171.4
2125 Female, age 91, both hemispheres 168.1
2182 Male, age 80, both hemispheres 160.0
2461 Male, age 61, both hemispheres 140.5
2277 Male, age 76, both hemispheres 121.5
Motor trigeminal nucleus
nTPM: 154.2
2079 Male, age 80, both hemispheres 164.0
2560 Male, age 74, both hemispheres 161.6
2321 Female, age 91, both hemispheres 151.7
2309 Male, age 76, both hemispheres 151.6
2335 Male, age 61, both hemispheres 142.2
Nuclei of the trapezoid body
nTPM: 155.0
2166 Male, age 80, both hemispheres 168.0
1983 Male, age 76, both hemispheres 161.0
2159 Male, age 61, both hemispheres 156.3
2368 Female, age 91, both hemispheres 153.9
2735 Female, age 85, both hemispheres 135.8
Nucleus ambiguus
nTPM: 170.8
2071 Male, age 76, both hemispheres 180.4
2096 Female, age 85, both hemispheres 161.3
Nucleus cuneatus
nTPM: 149.9
2380 Male, age 80, both hemispheres 164.2
2100 Male, age 76, both hemispheres 159.0
2808 Female, age 85, both hemispheres 158.6
2564 Male, age 74, both hemispheres 148.7
2562 Male, age 61, both hemispheres 137.5
2805 Female, age 91, both hemispheres 131.3
Nucleus gracilis
nTPM: 165.2
2382 Male, age 80, both hemispheres 178.8
2627 Male, age 74, both hemispheres 165.9
2299 Female, age 85, both hemispheres 151.0
Nucleus raphe magnus
nTPM: 155.6
2328 Male, age 80, both hemispheres 167.9
2459 Female, age 91, both hemispheres 166.7
2051 Male, age 76, both hemispheres 162.4
2455 Male, age 74, both hemispheres 159.1
2160 Male, age 61, both hemispheres 143.7
2172 Female, age 85, both hemispheres 133.8
Nucleus raphe obscurus
nTPM: 171.3
2845 Female, age 85, midline 177.8
2800 Male, age 61, midline 168.1
2142 Male, age 76, midline 167.9
Nucleus raphe pallidus
nTPM: 173.1
1924 Male, age 61, midline 204.9
2183 Male, age 80, midline 158.2
2145 Male, age 76, midline 156.2
Nucleus tractus solitarii
nTPM: 130.5
2144 Female, age 91, right hemisphere 131.9
2656 Male, age 76, both hemispheres 131.3
2307 Male, age 80, both hemispheres 129.7
2191 Female, age 85, both hemispheres 129.0
Paramedian reticular nucleus
nTPM: 153.4
2057 Male, age 80, both hemispheres 166.3
2050 Female, age 85, both hemispheres 156.8
2313 Male, age 61, both hemispheres 146.8
2052 Male, age 76, both hemispheres 143.5
Parvicellular reticular nuclei
nTPM: 153.6
2119 Male, age 80, both hemispheres 163.6
2095 Male, age 76, both hemispheres 156.5
2558 Male, age 74, both hemispheres 140.8
Parvicellular reticular nuclei, medullary
nTPM: 154.1
2189 Female, age 91, both hemispheres 157.2
2181 Male, age 80, left hemisphere 152.8
2091 Female, age 85, both hemispheres 152.4
Peritrigeminal nucleus
nTPM: 160.4
2136 Male, age 76, both hemispheres 165.7
2067 Female, age 85, both hemispheres 160.8
2179 Male, age 61, both hemispheres 154.9
Pontine nuclei
nTPM: 168.6
2454 Male, age 74, left hemisphere 196.9
2319 Female, age 91, both hemispheres 182.2
2115 Male, age 80, left hemisphere 169.9
2109 Female, age 72, unknown 165.2
1968 Male, age 76, left hemisphere 164.6
1863 Male, age 55, unknown 159.7
2727 Male, age 61, right hemisphere 156.5
2787 Female, age 85, both hemispheres 154.1
Pontine raphe nucleus
nTPM: 145.7
2122 Female, age 85, midline 149.6
2853 Male, age 76, midline 141.9
Posteroventral cochlear nucleus
nTPM: 170.4
2135 Female, age 91, both hemispheres 209.6
2341 Male, age 80, both hemispheres 174.9
2070 Male, age 76, both hemispheres 168.2
2752 Female, age 85, both hemispheres 153.3
2371 Male, age 61, both hemispheres 146.0
Prepositus hypoglossal nucleus
nTPM: 146.4
2855 Female, age 85, right hemisphere 150.8
2086 Male, age 80, both hemispheres 142.1
Principal sensory trigeminal nucleus
nTPM: 155.7
2367 Female, age 91, left hemisphere 179.0
2324 Male, age 76, both hemispheres 151.6
2008 Male, age 80, left hemisphere 151.1
2158 Male, age 61, both hemispheres 141.3
Reticular pontine nucleus, caudal
nTPM: 168.3
2092 Male, age 76, both hemispheres 175.6
2457 Female, age 91, both hemispheres 175.5
2559 Male, age 74, both hemispheres 168.2
2332 Male, age 80, right hemisphere 153.9
Reticular pontine nucleus, oral
nTPM: 170.6
2366 Female, age 91, both hemispheres 187.4
1939 Male, age 80, both hemispheres 170.4
2361 Male, age 74, both hemispheres 168.5
2012 Female, age 85, both hemispheres 163.6
2167 Male, age 76, both hemispheres 163.3
Reticulotegmental nucleus
nTPM: 151.6
2333 Male, age 80, both hemispheres 162.7
2322 Female, age 91, both hemispheres 158.8
2452 Male, age 74, both hemispheres 147.5
2325 Male, age 76, both hemispheres 137.3
Spinal trigeminal nucleus, caudal
nTPM: 156.9
2312 Male, age 61, both hemispheres 163.1
2447 Male, age 76, both hemispheres 159.3
2308 Male, age 80, both hemispheres 159.2
2390 Female, age 91, both hemispheres 154.5
2642 Male, age 74, both hemispheres 148.3
Spinal trigeminal nucleus, interpolar
nTPM: 153.4
2389 Female, age 91, both hemispheres 159.7
2386 Female, age 85, both hemispheres 155.0
2033 Male, age 80, both hemispheres 151.8
2625 Male, age 61, both hemispheres 151.6
2066 Male, age 76, right hemisphere 149.0
Spinal trigeminal nucleus, oral
nTPM: 153.7
1978 Male, age 76, both hemispheres 158.0
2164 Male, age 80, both hemispheres 156.7
2737 Female, age 85, both hemispheres 146.4
Spinal vestibular nucleus
nTPM: 161.5
2748 Male, age 76, both hemispheres 186.4
2806 Female, age 85, both hemispheres 167.2
2186 Female, age 91, both hemispheres 163.4
2780 Male, age 80, both hemispheres 160.8
2796 Male, age 61, both hemispheres 146.3
2384 Male, age 74, both hemispheres 144.8
Subcoeruleus area
nTPM: 153.8
2369 Female, age 85, left hemisphere 188.7
2089 Male, age 76, left hemisphere 156.1
1958 Male, age 80, both hemispheres 153.7
2323 Female, age 91, left hemisphere 140.4
2451 Male, age 74, both hemispheres 129.8
Superior olive
nTPM: 169.2
2020 Male, age 76, both hemispheres 181.4
2364 Male, age 74, right hemisphere 180.4
2329 Male, age 80, right hemisphere 165.7
1875 Female, age 85, both hemispheres 159.7
2561 Female, age 91, both hemispheres 158.7
Superior vestibular nucleus
nTPM: 149.1
2015 Male, age 80, both hemispheres 152.1
2383 Male, age 74, both hemispheres 151.1
2061 Male, age 76, both hemispheres 144.1
Ventral medullary reticular nucleus
nTPM: 164.5
2060 Male, age 76, both hemispheres 171.6
2372 Male, age 61, both hemispheres 157.4
Ventral periolivary nuclei
nTPM: 157.4
2023 Male, age 76, both hemispheres 183.9
2165 Male, age 80, both hemispheres 157.6
2130 Female, age 85, both hemispheres 147.7
2794 Female, age 91, left hemisphere 140.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 163.2
2118 Male, age 80, both hemispheres 171.5
1986 Male, age 76, both hemispheres 166.5
2180 Male, age 61, both hemispheres 165.1
2741 Female, age 85, both hemispheres 156.9
2302 Female, age 91, both hemispheres 155.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 164.8
2840 Female, age 85, both hemispheres 174.0
2456 Female, age 91, both hemispheres 169.6
1959 Male, age 76, both hemispheres 165.9
2161 Male, age 80, both hemispheres 162.1
2449 Male, age 74, both hemispheres 161.1
2359 Male, age 61, both hemispheres 156.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 443.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 285.2
FF:10182-103D2 60 years, female 305.3
FF:10165-103B3 76 years, female 265.2
Medulla oblongata
Scaled Tags Per Million: 443.6
FF:10174-103C3 60 years, female 745.8
FF:10038-101F2 18-64 years, mixed 327.1
FF:10155-103A2 76 years, female 257.8
Pons
Scaled Tags Per Million: 325.3
FF:10033-101E6 18-54 years, mixed 325.3

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 0.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 39.8
Samples: 4

Max nTPM: 46.1
Min nTPM: 29.7
Sample A Female 41.1
Sample B Female 29.7
Sample C Male 42.3
Sample D Male 46.1
Pons
nTPM: 29.5
Samples: 4

Max nTPM: 40.8
Min nTPM: 21.9
Sample A Female 27.3
Sample B Female 21.9
Sample C Male 28.1
Sample D Male 40.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 88.5
Samples: 4

Max nTPM: 92.9
Min nTPM: 84.9
Sample A Male 92.9
Sample B Male 84.9
Sample C Female 90.6
Sample D Female 85.6

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.9
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 3.9
Medulla oblongata
Expression energy: 3.9
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 3.9
Pons
Expression energy: 4.2
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 4.2
Pons
Expression energy: 4.2
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 4.2

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