HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:106.2 nTPM
HPA:106.2 nTPM
GTEx:104.8 nTPM
FANTOM5:210.3 Scaled Tags Per Million
Pig:44.5 nTPM
Mouse:78.0 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069290
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.2
Sample id Sample description nTPM
Hippocampus
nTPM: 101.1
1898 Male, age 80, left hemisphere 107.0
2621 Female, age 67, right hemisphere 104.2
2148 Female, age 91, left hemisphere 101.6
2529 Female, age 94, left hemisphere 100.8
1911 Female, age 85, right hemisphere 96.9
1855 Male, age 76, left hemisphere 96.3
Dentate gyrus
nTPM: 100.8
1927 Female, age 91, both hemispheres 107.7
2530 Female, age 94, left hemisphere 105.3
2010 Male, age 76, both hemispheres 100.4
2246 Female, age 85, both hemispheres 97.3
2531 Female, age 67, both hemispheres 97.1
2528 Male, age 74, both hemispheres 97.0
Entorhinal gyrus
nTPM: 99.4
2764 Male, age 80, right hemisphere 105.2
1787 Male, age 76, left hemisphere 101.4
1938 Female, age 85, left hemisphere 100.2
2613 Female, age 94, left hemisphere 99.1
2686 Male, age 75, right hemisphere 96.2
2117 Female, age 91, right hemisphere 94.2
Hippocampus, CA1
nTPM: 102.7
2749 Male, age 80, left hemisphere 119.2
2527 Male, age 74, both hemispheres 102.6
1873 Female, age 85, both hemispheres 100.6
2082 Female, age 91, right hemisphere 95.8
2045 Male, age 76, both hemispheres 95.3
Hippocampus, CA2
nTPM: 102.1
1963 Male, age 80, left hemisphere 108.8
1892 Male, age 76, both hemispheres 103.7
1940 Female, age 85, left hemisphere 102.9
2249 Male, age 74, both hemispheres 102.8
2437 Female, age 94, left hemisphere 97.8
2113 Female, age 91, right hemisphere 96.7
Hippocampus, CA3
nTPM: 102.3
2137 Male, age 80, left hemisphere 106.9
2436 Male, age 74, both hemispheres 106.4
2620 Female, age 94, left hemisphere 106.2
1867 Male, age 76, both hemispheres 98.7
2861 Female, age 67, both hemispheres 98.0
1891 Female, age 85, both hemispheres 97.5
Parahippocampal cortex
nTPM: 100.3
1850 Male, age 80, both hemispheres 106.0
2532 Female, age 72, left hemisphere 103.5
1933 Female, age 85, both hemispheres 102.1
2250 Female, age 67, right hemisphere 102.0
1990 Female, age 91, right hemisphere 99.9
2245 Female, age 91, both hemispheres 99.5
2692 Male, age 74, both hemispheres 98.2
2693 Female, age 94, both hemispheres 98.1
2018 Male, age 76, both hemispheres 97.2
2622 Female, age 67, right hemisphere 96.5
Perirhinal gyrus
nTPM: 106.2
1794 Male, age 80, right hemisphere 110.2
1847 Female, age 91, left hemisphere 109.3
1841 Female, age 85, right hemisphere 107.7
2521 Female, age 94, right hemisphere 105.0
2848 Male, age 76, right hemisphere 99.0
Subiculum
nTPM: 100.1
2438 Female, age 94, left hemisphere 105.2
2619 Male, age 74, both hemispheres 101.5
1901 Male, age 80, both hemispheres 100.4
1977 Female, age 85, both hemispheres 100.4
2042 Male, age 76, both hemispheres 96.6
2729 Female, age 91, right hemisphere 96.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.8
Samples: 197

Max nTPM: 192.0
Min nTPM: 64.2
Std nTPM: 24.1
Median nTPM: 104.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 192.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 183.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 180.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 171.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 170.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 168.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 161.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 160.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 157.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 149.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 149.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 210.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 210.3
FF:10169-103B7 60 years, female 260.5
FF:10153-102I9 76 years, female 160.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.5
Samples: 4

Max nTPM: 57.9
Min nTPM: 38.4
Sample A Female 57.9
Sample B Female 42.5
Sample C Male 38.4
Sample D Male 39.3
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 42.9
Min nTPM: 32.2
Sample A Female 42.9
Sample B Female 39.8
Sample C Male 37.3
Sample D Male 32.2
Subiculum
nTPM: 37.5
Samples: 4

Max nTPM: 50.8
Min nTPM: 31.0
Sample A Female 50.8
Sample B Female 31.0
Sample C Male 37.1
Sample D Male 31.1
Ventral hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 49.7
Min nTPM: 29.8
Sample A Female 43.1
Sample B Female 29.8
Sample C Male 48.4
Sample D Male 49.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.0
Samples: 4

Max nTPM: 83.1
Min nTPM: 72.6
Sample A Male 72.6
Sample B Male 80.2
Sample C Female 83.1
Sample D Female 76.1
Hippocampal formation
nTPM: 71.8
Samples: 4

Max nTPM: 82.8
Min nTPM: 66.0
Sample A Male 82.8
Sample B Male 66.9
Sample C Female 66.0
Sample D Female 71.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70474827 Antisense, RP_050623_01_B01, Mouse strain C57BL/6J (56 days, male) 6.6

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