HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:252.8 nTPM
HPA:252.8 nTPM
GTEx:46.1 nTPM
FANTOM5:244.1 Scaled Tags Per Million
Pig:71.4 nTPM
Mouse:80.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017380Antibody HPA058557Antibody CAB047320
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 252.8
Sample id Sample description nTPM
Hippocampus
nTPM: 251.4
2529 Female, age 94, left hemisphere 259.3
1898 Male, age 80, left hemisphere 255.0
1855 Male, age 76, left hemisphere 254.0
2621 Female, age 67, right hemisphere 247.4
2148 Female, age 91, left hemisphere 247.1
1911 Female, age 85, right hemisphere 245.6
Dentate gyrus
nTPM: 247.8
2010 Male, age 76, both hemispheres 257.0
2530 Female, age 94, left hemisphere 252.2
2528 Male, age 74, both hemispheres 250.6
2246 Female, age 85, both hemispheres 244.4
1927 Female, age 91, both hemispheres 242.9
2531 Female, age 67, both hemispheres 239.8
Entorhinal gyrus
nTPM: 247.5
2117 Female, age 91, right hemisphere 254.8
1938 Female, age 85, left hemisphere 250.6
1787 Male, age 76, left hemisphere 248.1
2764 Male, age 80, right hemisphere 247.0
2686 Male, age 75, right hemisphere 243.5
2613 Female, age 94, left hemisphere 241.1
Hippocampus, CA1
nTPM: 249.6
2045 Male, age 76, both hemispheres 251.5
2527 Male, age 74, both hemispheres 251.5
1873 Female, age 85, both hemispheres 249.4
2749 Male, age 80, left hemisphere 249.3
2082 Female, age 91, right hemisphere 246.1
Hippocampus, CA2
nTPM: 250.1
2249 Male, age 74, both hemispheres 254.9
2437 Female, age 94, left hemisphere 252.1
1892 Male, age 76, both hemispheres 250.0
1963 Male, age 80, left hemisphere 248.9
1940 Female, age 85, left hemisphere 247.9
2113 Female, age 91, right hemisphere 246.6
Hippocampus, CA3
nTPM: 249.9
2436 Male, age 74, both hemispheres 263.2
1867 Male, age 76, both hemispheres 251.5
1891 Female, age 85, both hemispheres 249.4
2137 Male, age 80, left hemisphere 248.4
2620 Female, age 94, left hemisphere 244.1
2861 Female, age 67, both hemispheres 242.8
Parahippocampal cortex
nTPM: 248.5
2018 Male, age 76, both hemispheres 256.9
2245 Female, age 91, both hemispheres 254.1
1850 Male, age 80, both hemispheres 252.1
1990 Female, age 91, right hemisphere 249.6
1933 Female, age 85, both hemispheres 249.0
2250 Female, age 67, right hemisphere 247.7
2532 Female, age 72, left hemisphere 245.3
2692 Male, age 74, both hemispheres 243.7
2693 Female, age 94, both hemispheres 243.5
2622 Female, age 67, right hemisphere 242.9
Perirhinal gyrus
nTPM: 248.2
1841 Female, age 85, right hemisphere 250.8
1794 Male, age 80, right hemisphere 250.2
1847 Female, age 91, left hemisphere 250.1
2521 Female, age 94, right hemisphere 245.3
2848 Male, age 76, right hemisphere 244.5
Subiculum
nTPM: 252.8
2042 Male, age 76, both hemispheres 259.2
2438 Female, age 94, left hemisphere 257.7
2619 Male, age 74, both hemispheres 250.4
1977 Female, age 85, both hemispheres 250.1
1901 Male, age 80, both hemispheres 249.8
2729 Female, age 91, right hemisphere 249.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.1
Samples: 197

Max nTPM: 98.3
Min nTPM: 25.5
Std nTPM: 10.8
Median nTPM: 45.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 98.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 95.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 83.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 81.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 72.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 68.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 68.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 67.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 65.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 64.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 244.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 244.1
FF:10169-103B7 60 years, female 263.6
FF:10153-102I9 76 years, female 224.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.3
Samples: 4

Max nTPM: 96.1
Min nTPM: 59.1
Sample A Female 96.1
Sample B Female 69.4
Sample C Male 60.5
Sample D Male 59.1
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 72.1
Min nTPM: 50.2
Sample A Female 70.0
Sample B Female 72.1
Sample C Male 65.2
Sample D Male 50.2
Subiculum
nTPM: 70.5
Samples: 4

Max nTPM: 98.1
Min nTPM: 56.2
Sample A Female 98.1
Sample B Female 65.5
Sample C Male 56.2
Sample D Male 62.2
Ventral hippocampus
nTPM: 71.5
Samples: 4

Max nTPM: 85.4
Min nTPM: 48.9
Sample A Female 75.3
Sample B Female 48.9
Sample C Male 85.4
Sample D Male 76.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.3
Samples: 4

Max nTPM: 75.7
Min nTPM: 73.0
Sample A Male 75.1
Sample B Male 73.0
Sample C Female 75.7
Sample D Female 73.2
Hippocampal formation
nTPM: 80.7
Samples: 4

Max nTPM: 88.0
Min nTPM: 70.7
Sample A Male 88.0
Sample B Male 70.7
Sample C Female 80.1
Sample D Female 83.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
1344 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.7
1343 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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