COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.2 nTPM
HPA:36.2 nTPM
GTEx:50.2 nTPM
FANTOM5:62.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA018976Antibody HPA029591
Endothelial cells Not detectedLow
Glandular cells LowMedium
Peripheral nerve/ganglion MediumMedium





COLON - HPA RNA-seqi
Average nTPM 36.2
overview
Male, age 54 		Colon sample 67
nTPM: 36.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 39.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 41.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 33.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 40
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 47.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 27
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 22.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 41.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 34.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 33
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 38.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 34.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 50.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 50.2
Samples: 373

Max nTPM: 106.7
Min nTPM: 19.7
Std nTPM: 13.9
Median nTPM: 48.8
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 106.7
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 99.6
GTEX-183WM-2526-SM-731BP 70-79 years, female 94.5
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 84.7
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 84.0
GTEX-18A6Q-2226-SM-7LG61 60-69 years, male 83.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 82.8
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 82.4
GTEX-ZF2S-1826-SM-4WKFF 50-59 years, female 82.0
GTEX-17F96-2126-SM-7KFSM 70-79 years, male 78.5
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 77.6
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Colon - Transverse
Average nTPM: 36.5
Samples: 406

Max nTPM: 82.9
Min nTPM: 19.2
Std nTPM: 10.8
Median nTPM: 33.4
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 82.9
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 74.9
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 73.3
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 71.1
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 70.6
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 68.3
GTEX-11GSP-1626-SM-5986N 60-69 years, female 67.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 66.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 66.2
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 65.7
GTEX-17F96-2026-SM-79ON4 70-79 years, male 64.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 62.8
FF:10014-101C5 62,83,84 years, mixed 62.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.