PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:70.4 nTPM
HPA:70.4 nTPM
FANTOM5:42.6 Scaled Tags Per Million
Pig:82.4 nTPM
Mouse:178.0 nTPM
Allen mouse:6.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 70.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 44.4
1984 Male, age 76, both hemispheres 52.1
2090 Male, age 80, both hemispheres 43.3
2188 Female, age 91, both hemispheres 41.2
2301 Female, age 85, both hemispheres 40.9
Area postrema
nTPM: 24.9
2054 Male, age 76, both hemispheres 37.6
2306 Male, age 80, both hemispheres 27.9
2799 Male, age 61, both hemispheres 9.3
Cuneate nuclei
nTPM: 53.5
2131 Male, age 76, both hemispheres 78.4
2381 Male, age 80, both hemispheres 41.6
2376 Male, age 61, both hemispheres 40.5
Dorsal cochlear nucleus
nTPM: 46.8
2058 Male, age 76, both hemispheres 57.9
2802 Male, age 74, right hemisphere 55.9
2370 Male, age 61, both hemispheres 44.4
2378 Male, age 80, both hemispheres 39.3
2187 Female, age 91, both hemispheres 36.4
Dorsal medullary reticular nucleus
nTPM: 63.3
2040 Female, age 85, both hemispheres 71.4
2088 Male, age 76, both hemispheres 67.3
2373 Male, age 61, both hemispheres 51.2
Dorsal motor vagal complex
nTPM: 48.5
2133 Female, age 91, both hemispheres 73.2
2643 Male, age 74, both hemispheres 57.2
2000 Male, age 74, unknown 55.3
2185 Male, age 76, both hemispheres 44.9
2844 Male, age 55, unknown 42.9
2807 Female, age 85, both hemispheres 40.2
2813 Female, age 72, unknown 37.7
2797 Male, age 61, both hemispheres 36.6
Dorsal tegmental nucleus
nTPM: 44.2
2083 Male, age 80, both hemispheres 54.5
1936 Male, age 76, left hemisphere 45.0
2358 Male, age 61, both hemispheres 39.6
2326 Male, age 74, both hemispheres 37.8
Dorsolateral tegmental area
nTPM: 36.5
2141 Male, age 76, both hemispheres 47.4
2751 Female, age 85, both hemispheres 42.9
2654 Male, age 80, both hemispheres 41.3
2337 Male, age 61, both hemispheres 28.5
2360 Male, age 74, both hemispheres 22.3
Gigantocellular reticular nuclei, medullary
nTPM: 52.4
2462 Male, age 74, both hemispheres 73.0
2022 Male, age 76, right hemisphere 61.3
2310 Male, age 80, both hemispheres 55.0
1876 Female, age 85, both hemispheres 53.2
2387 Female, age 91, both hemispheres 47.9
2314 Male, age 61, both hemispheres 24.3
Gigantocellular reticular nuclei, pars
nTPM: 54.9
2084 Female, age 85, both hemispheres 72.2
2168 Male, age 76, both hemispheres 63.6
2336 Male, age 61, both hemispheres 52.7
2330 Male, age 80, both hemispheres 44.7
2706 Male, age 80, both hemispheres 41.1
Inferior olive
nTPM: 22.4
2628 Female, age 91, both hemispheres 46.6
2085 Female, age 85, both hemispheres 24.2
2178 Male, age 61, both hemispheres 19.1
2563 Male, age 74, both hemispheres 12.0
2379 Male, age 80, both hemispheres 10.0
Kolliker-Fuse nucleus
nTPM: 43.8
2793 Female, age 91, left hemisphere 57.6
2163 Male, age 80, both hemispheres 57.5
2315 Male, age 76, right hemisphere 16.3
Lateral lemniscal nuclei
nTPM: 64.0
2453 Male, age 74, right hemisphere 78.4
2320 Female, age 91, left hemisphere 66.4
2169 Male, age 76, both hemispheres 66.1
2746 Female, age 85, left hemisphere 57.6
2036 Male, age 80, both hemispheres 51.6
Lateral medullary reticular nucleus
nTPM: 36.5
2044 Male, age 76, both hemispheres 68.0
2190 Female, age 85, both hemispheres 40.6
2374 Male, age 61, both hemispheres 34.7
2852 Male, age 80, both hemispheres 29.9
2804 Female, age 91, both hemispheres 28.1
2305 Male, age 74, both hemispheres 17.5
Lateral parabrachial nucleus
nTPM: 47.6
2139 Female, age 85, right hemisphere 61.5
2790 Male, age 61, both hemispheres 60.4
2013 Male, age 80, both hemispheres 43.7
2792 Male, age 76, both hemispheres 24.9
Lateral vestibular nucleus
nTPM: 51.2
2184 Male, age 76, both hemispheres 65.1
2311 Male, age 80, both hemispheres 37.3
Locus coeruleus
nTPM: 46.1
2162 Male, age 80, both hemispheres 57.6
2720 Male, age 74, both hemispheres 57.5
2123 Female, age 91, both hemispheres 54.3
2317 Female, age 72, unknown 40.7
1980 Male, age 76, both hemispheres 40.3
2014 Male, age 55, unknown 38.5
2788 Male, age 74, unknown 34.0
Medial olivary nucleus
nTPM: 22.0
2851 Male, age 80, both hemispheres 32.2
1943 Male, age 61, both hemispheres 22.5
2138 Female, age 91, both hemispheres 21.3
1962 Male, age 76, both hemispheres 11.8
Medial parabrachial nucleus
nTPM: 50.2
2156 Male, age 61, both hemispheres 71.0
2786 Male, age 76, both hemispheres 55.1
2854 Male, age 80, both hemispheres 47.0
2463 Female, age 85, right hemisphere 42.6
2170 Female, age 91, both hemispheres 35.3
Medial periolivary nuclei
nTPM: 56.9
2171 Female, age 85, both hemispheres 74.2
2063 Male, age 76, both hemispheres 65.0
2458 Female, age 91, both hemispheres 58.0
2081 Male, age 80, both hemispheres 44.2
2791 Male, age 74, right hemisphere 43.3
Medial vestibular nucleus
nTPM: 57.8
2624 Male, age 61, both hemispheres 75.4
2093 Male, age 80, both hemispheres 61.6
2134 Male, age 76, both hemispheres 60.6
2803 Female, age 91, both hemispheres 54.0
2801 Male, age 74, both hemispheres 48.4
2743 Female, age 85, both hemispheres 46.9
Motor facial nucleus
nTPM: 66.8
2327 Male, age 80, both hemispheres 76.1
2062 Male, age 76, both hemispheres 70.3
2126 Male, age 61, both hemispheres 65.8
2697 Female, age 85, both hemispheres 63.8
2795 Female, age 91, both hemispheres 63.4
2365 Male, age 74, right hemisphere 61.5
Motor hypoglossal nucleus
nTPM: 57.4
2132 Female, age 85, both hemispheres 68.4
2125 Female, age 91, both hemispheres 67.3
2461 Male, age 61, both hemispheres 64.6
2182 Male, age 80, both hemispheres 52.0
2277 Male, age 76, both hemispheres 34.7
Motor trigeminal nucleus
nTPM: 55.4
2560 Male, age 74, both hemispheres 63.4
2079 Male, age 80, both hemispheres 61.5
2335 Male, age 61, both hemispheres 53.1
2321 Female, age 91, both hemispheres 50.0
2309 Male, age 76, both hemispheres 49.0
Nuclei of the trapezoid body
nTPM: 66.0
2735 Female, age 85, both hemispheres 77.7
2159 Male, age 61, both hemispheres 72.3
1983 Male, age 76, both hemispheres 66.1
2166 Male, age 80, both hemispheres 57.2
2368 Female, age 91, both hemispheres 56.8
Nucleus ambiguus
nTPM: 70.4
2096 Female, age 85, both hemispheres 123.7
2071 Male, age 76, both hemispheres 17.2
Nucleus cuneatus
nTPM: 47.3
2100 Male, age 76, both hemispheres 71.0
2564 Male, age 74, both hemispheres 57.5
2562 Male, age 61, both hemispheres 53.5
2805 Female, age 91, both hemispheres 50.8
2808 Female, age 85, both hemispheres 32.1
2380 Male, age 80, both hemispheres 19.0
Nucleus gracilis
nTPM: 36.2
2382 Male, age 80, both hemispheres 36.6
2627 Male, age 74, both hemispheres 36.2
2299 Female, age 85, both hemispheres 35.8
Nucleus raphe magnus
nTPM: 70.4
2172 Female, age 85, both hemispheres 93.0
2160 Male, age 61, both hemispheres 74.9
2455 Male, age 74, both hemispheres 70.6
2328 Male, age 80, both hemispheres 67.9
2459 Female, age 91, both hemispheres 60.9
2051 Male, age 76, both hemispheres 55.2
Nucleus raphe obscurus
nTPM: 23.9
2800 Male, age 61, midline 35.4
2845 Female, age 85, midline 23.5
2142 Male, age 76, midline 12.9
Nucleus raphe pallidus
nTPM: 28.8
2183 Male, age 80, midline 41.7
1924 Male, age 61, midline 26.6
2145 Male, age 76, midline 18.0
Nucleus tractus solitarii
nTPM: 42.7
2307 Male, age 80, both hemispheres 54.1
2656 Male, age 76, both hemispheres 47.4
2191 Female, age 85, both hemispheres 38.7
2144 Female, age 91, right hemisphere 30.9
Paramedian reticular nucleus
nTPM: 53.8
2050 Female, age 85, both hemispheres 73.1
2313 Male, age 61, both hemispheres 56.0
2057 Male, age 80, both hemispheres 54.5
2052 Male, age 76, both hemispheres 31.8
Parvicellular reticular nuclei
nTPM: 60.2
2558 Male, age 74, both hemispheres 82.7
2095 Male, age 76, both hemispheres 49.2
2119 Male, age 80, both hemispheres 48.6
Parvicellular reticular nuclei, medullary
nTPM: 63.2
2091 Female, age 85, both hemispheres 73.8
2189 Female, age 91, both hemispheres 60.6
2181 Male, age 80, left hemisphere 55.3
Peritrigeminal nucleus
nTPM: 49.0
2179 Male, age 61, both hemispheres 55.5
2067 Female, age 85, both hemispheres 50.1
2136 Male, age 76, both hemispheres 41.5
Pontine nuclei
nTPM: 65.2
2787 Female, age 85, both hemispheres 94.5
1863 Male, age 55, unknown 72.4
1968 Male, age 76, left hemisphere 70.1
2727 Male, age 61, right hemisphere 67.2
2115 Male, age 80, left hemisphere 60.9
2109 Female, age 72, unknown 56.5
2454 Male, age 74, left hemisphere 55.6
2319 Female, age 91, both hemispheres 44.3
Pontine raphe nucleus
nTPM: 60.4
2122 Female, age 85, midline 67.9
2853 Male, age 76, midline 52.9
Posteroventral cochlear nucleus
nTPM: 43.9
2752 Female, age 85, both hemispheres 61.1
2070 Male, age 76, both hemispheres 53.0
2371 Male, age 61, both hemispheres 43.6
2135 Female, age 91, both hemispheres 31.4
2341 Male, age 80, both hemispheres 30.4
Prepositus hypoglossal nucleus
nTPM: 47.7
2086 Male, age 80, both hemispheres 52.5
2855 Female, age 85, right hemisphere 42.8
Principal sensory trigeminal nucleus
nTPM: 62.1
2158 Male, age 61, both hemispheres 79.8
2008 Male, age 80, left hemisphere 58.6
2324 Male, age 76, both hemispheres 55.6
2367 Female, age 91, left hemisphere 54.4
Reticular pontine nucleus, caudal
nTPM: 60.7
2332 Male, age 80, right hemisphere 79.2
2457 Female, age 91, both hemispheres 61.1
2092 Male, age 76, both hemispheres 53.4
2559 Male, age 74, both hemispheres 49.0
Reticular pontine nucleus, oral
nTPM: 54.3
2366 Female, age 91, both hemispheres 62.5
2012 Female, age 85, both hemispheres 60.5
2167 Male, age 76, both hemispheres 52.9
2361 Male, age 74, both hemispheres 49.7
1939 Male, age 80, both hemispheres 45.9
Reticulotegmental nucleus
nTPM: 57.9
2333 Male, age 80, both hemispheres 61.2
2452 Male, age 74, both hemispheres 60.1
2322 Female, age 91, both hemispheres 56.7
2325 Male, age 76, both hemispheres 53.6
Spinal trigeminal nucleus, caudal
nTPM: 57.0
2390 Female, age 91, both hemispheres 71.8
2447 Male, age 76, both hemispheres 71.5
2642 Male, age 74, both hemispheres 55.7
2308 Male, age 80, both hemispheres 48.1
2312 Male, age 61, both hemispheres 37.9
Spinal trigeminal nucleus, interpolar
nTPM: 63.3
2625 Male, age 61, both hemispheres 78.5
2066 Male, age 76, right hemisphere 74.6
2033 Male, age 80, both hemispheres 57.6
2386 Female, age 85, both hemispheres 55.1
2389 Female, age 91, both hemispheres 50.5
Spinal trigeminal nucleus, oral
nTPM: 59.5
2164 Male, age 80, both hemispheres 64.0
2737 Female, age 85, both hemispheres 59.3
1978 Male, age 76, both hemispheres 55.3
Spinal vestibular nucleus
nTPM: 55.8
2186 Female, age 91, both hemispheres 65.0
2748 Male, age 76, both hemispheres 58.2
2806 Female, age 85, both hemispheres 56.0
2780 Male, age 80, both hemispheres 52.4
2796 Male, age 61, both hemispheres 51.9
2384 Male, age 74, both hemispheres 51.4
Subcoeruleus area
nTPM: 54.2
2323 Female, age 91, left hemisphere 66.5
2089 Male, age 76, left hemisphere 65.3
1958 Male, age 80, both hemispheres 50.7
2451 Male, age 74, both hemispheres 48.7
2369 Female, age 85, left hemisphere 39.9
Superior olive
nTPM: 56.7
1875 Female, age 85, both hemispheres 66.3
2561 Female, age 91, both hemispheres 64.7
2329 Male, age 80, right hemisphere 59.4
2020 Male, age 76, both hemispheres 49.8
2364 Male, age 74, right hemisphere 43.2
Superior vestibular nucleus
nTPM: 30.2
2015 Male, age 80, both hemispheres 37.1
2061 Male, age 76, both hemispheres 34.6
2383 Male, age 74, both hemispheres 18.9
Ventral medullary reticular nucleus
nTPM: 47.5
2060 Male, age 76, both hemispheres 61.6
2372 Male, age 61, both hemispheres 33.4
Ventral periolivary nuclei
nTPM: 65.2
2130 Female, age 85, both hemispheres 84.3
2165 Male, age 80, both hemispheres 69.4
2794 Female, age 91, left hemisphere 60.4
2023 Male, age 76, both hemispheres 46.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 43.9
1986 Male, age 76, both hemispheres 56.2
2741 Female, age 85, both hemispheres 54.7
2118 Male, age 80, both hemispheres 37.7
2302 Female, age 91, both hemispheres 36.7
2180 Male, age 61, both hemispheres 34.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 56.3
2449 Male, age 74, both hemispheres 69.8
2840 Female, age 85, both hemispheres 61.5
1959 Male, age 76, both hemispheres 56.9
2456 Female, age 91, both hemispheres 54.7
2161 Male, age 80, both hemispheres 50.2
2359 Male, age 61, both hemispheres 44.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 23.8
FF:10182-103D2 60 years, female 26.0
FF:10165-103B3 76 years, female 21.6
Medulla oblongata
Scaled Tags Per Million: 16.6
FF:10038-101F2 18-64 years, mixed 26.3
FF:10155-103A2 76 years, female 14.8
FF:10174-103C3 60 years, female 8.6
Pons
Scaled Tags Per Million: 42.6
FF:10033-101E6 18-54 years, mixed 42.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 82.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 55.7
Samples: 4

Max nTPM: 68.2
Min nTPM: 35.2
Sample A Female 54.8
Sample B Female 68.2
Sample C Male 64.7
Sample D Male 35.2
Pons
nTPM: 82.4
Samples: 4

Max nTPM: 128.2
Min nTPM: 59.7
Sample A Female 128.2
Sample B Female 60.9
Sample C Male 59.7
Sample D Male 80.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 178.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 178.1
Samples: 4

Max nTPM: 182.3
Min nTPM: 173.8
Sample A Male 173.8
Sample B Male 180.4
Sample C Female 175.7
Sample D Female 182.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.8
100144096 Antisense, RP_110407_03_B09, Mouse strain C57BL/6J (56 days, male) 6.8
Pons
Expression energy: 6.5
100144096 Antisense, RP_110407_03_B09, Mouse strain C57BL/6J (56 days, male) 6.5

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