HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:19.9 nTPM
HPA:19.9 nTPM
GTEx:13.3 nTPM
FANTOM5:15.5 Scaled Tags Per Million
Pig:3.9 nTPM
Mouse:6.6 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.9
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1855 Male, age 76, left hemisphere 19.3
2148 Female, age 91, left hemisphere 18.3
1911 Female, age 85, right hemisphere 17.6
1898 Male, age 80, left hemisphere 17.2
2621 Female, age 67, right hemisphere 16.6
2529 Female, age 94, left hemisphere 14.9
Dentate gyrus
nTPM: 16.9
2010 Male, age 76, both hemispheres 19.5
1927 Female, age 91, both hemispheres 17.8
2531 Female, age 67, both hemispheres 16.8
2530 Female, age 94, left hemisphere 16.5
2246 Female, age 85, both hemispheres 16.1
2528 Male, age 74, both hemispheres 14.7
Entorhinal gyrus
nTPM: 16.8
2613 Female, age 94, left hemisphere 18.5
2686 Male, age 75, right hemisphere 18.5
2764 Male, age 80, right hemisphere 18.3
1787 Male, age 76, left hemisphere 15.6
2117 Female, age 91, right hemisphere 15.0
1938 Female, age 85, left hemisphere 14.9
Hippocampus, CA1
nTPM: 19.5
2749 Male, age 80, left hemisphere 23.7
2045 Male, age 76, both hemispheres 22.7
1873 Female, age 85, both hemispheres 20.1
2527 Male, age 74, both hemispheres 15.9
2082 Female, age 91, right hemisphere 14.9
Hippocampus, CA2
nTPM: 16.5
1892 Male, age 76, both hemispheres 19.7
1963 Male, age 80, left hemisphere 17.6
1940 Female, age 85, left hemisphere 15.9
2249 Male, age 74, both hemispheres 15.5
2437 Female, age 94, left hemisphere 15.5
2113 Female, age 91, right hemisphere 15.0
Hippocampus, CA3
nTPM: 19.9
1867 Male, age 76, both hemispheres 26.1
2137 Male, age 80, left hemisphere 23.2
2861 Female, age 67, both hemispheres 19.4
2620 Female, age 94, left hemisphere 18.7
1891 Female, age 85, both hemispheres 16.5
2436 Male, age 74, both hemispheres 15.4
Parahippocampal cortex
nTPM: 16.0
2622 Female, age 67, right hemisphere 17.8
2245 Female, age 91, both hemispheres 17.4
2693 Female, age 94, both hemispheres 17.1
2532 Female, age 72, left hemisphere 16.0
1990 Female, age 91, right hemisphere 15.8
2692 Male, age 74, both hemispheres 15.5
1933 Female, age 85, both hemispheres 15.3
1850 Male, age 80, both hemispheres 15.1
2018 Male, age 76, both hemispheres 15.0
2250 Female, age 67, right hemisphere 14.6
Perirhinal gyrus
nTPM: 15.2
1847 Female, age 91, left hemisphere 15.6
2521 Female, age 94, right hemisphere 15.6
2848 Male, age 76, right hemisphere 15.2
1794 Male, age 80, right hemisphere 14.9
1841 Female, age 85, right hemisphere 14.5
Subiculum
nTPM: 17.1
1901 Male, age 80, both hemispheres 20.1
2042 Male, age 76, both hemispheres 18.5
2729 Female, age 91, right hemisphere 16.5
2619 Male, age 74, both hemispheres 16.4
2438 Female, age 94, left hemisphere 16.0
1977 Female, age 85, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 31.7
Min nTPM: 6.0
Std nTPM: 3.4
Median nTPM: 12.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 25.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 22.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 20.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 20.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 20.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 20.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 20.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 20.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 19.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.5
FF:10153-102I9 76 years, female 16.4
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.9
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.4
Sample A Female 4.2
Sample B Female 4.3
Sample C Male 3.5
Sample D Male 3.4
Entorhinal cortex
nTPM: 3.6
Samples: 4

Max nTPM: 4.0
Min nTPM: 3.2
Sample A Female 4.0
Sample B Female 3.6
Sample C Male 3.2
Sample D Male 3.7
Subiculum
nTPM: 3.5
Samples: 4

Max nTPM: 4.0
Min nTPM: 3.2
Sample A Female 4.0
Sample B Female 3.3
Sample C Male 3.2
Sample D Male 3.6
Ventral hippocampus
nTPM: 3.9
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.1
Sample A Female 3.5
Sample B Female 3.1
Sample C Male 4.8
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.9
Sample A Male 5.7
Sample B Male 5.4
Sample C Female 6.0
Sample D Female 4.9
Hippocampal formation
nTPM: 6.6
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.1
Sample A Male 6.6
Sample B Male 6.1
Sample C Female 6.4
Sample D Female 7.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69059805 Antisense, RP_050317_04_A10, Mouse strain C57BL/6J (56 days, male) 3.4

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