HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:174.2 nTPM
HPA:174.2 nTPM
GTEx:488.7 nTPM
FANTOM5:211.2 Scaled Tags Per Million
Pig:287.4 nTPM
Mouse:561.0 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045095Antibody HPA050165
Glial cells MediumLow
Neuronal cells HighHigh



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 174.2
Sample id Sample description nTPM
Hippocampus
nTPM: 174.2
1898 Male, age 80, left hemisphere 197.1
2529 Female, age 94, left hemisphere 196.3
2148 Female, age 91, left hemisphere 165.5
2621 Female, age 67, right hemisphere 165.5
1911 Female, age 85, right hemisphere 161.3
1855 Male, age 76, left hemisphere 159.7
Dentate gyrus
nTPM: 173.7
2530 Female, age 94, left hemisphere 212.0
2010 Male, age 76, both hemispheres 182.2
2531 Female, age 67, both hemispheres 167.8
2528 Male, age 74, both hemispheres 165.4
2246 Female, age 85, both hemispheres 159.7
1927 Female, age 91, both hemispheres 155.2
Entorhinal gyrus
nTPM: 168.4
2117 Female, age 91, right hemisphere 185.5
2764 Male, age 80, right hemisphere 176.1
1787 Male, age 76, left hemisphere 173.7
2686 Male, age 75, right hemisphere 166.8
1938 Female, age 85, left hemisphere 164.6
2613 Female, age 94, left hemisphere 143.8
Hippocampus, CA1
nTPM: 169.2
2749 Male, age 80, left hemisphere 180.0
2527 Male, age 74, both hemispheres 172.1
2082 Female, age 91, right hemisphere 167.7
1873 Female, age 85, both hemispheres 167.3
2045 Male, age 76, both hemispheres 158.7
Hippocampus, CA2
nTPM: 172.0
1963 Male, age 80, left hemisphere 181.3
2249 Male, age 74, both hemispheres 175.3
2437 Female, age 94, left hemisphere 171.3
1892 Male, age 76, both hemispheres 169.5
2113 Female, age 91, right hemisphere 167.7
1940 Female, age 85, left hemisphere 167.0
Hippocampus, CA3
nTPM: 161.2
1867 Male, age 76, both hemispheres 175.4
2861 Female, age 67, both hemispheres 167.8
1891 Female, age 85, both hemispheres 167.2
2436 Male, age 74, both hemispheres 162.4
2137 Male, age 80, left hemisphere 158.3
2620 Female, age 94, left hemisphere 136.3
Parahippocampal cortex
nTPM: 161.6
2018 Male, age 76, both hemispheres 180.9
2250 Female, age 67, right hemisphere 173.3
2245 Female, age 91, both hemispheres 171.3
2532 Female, age 72, left hemisphere 171.1
1990 Female, age 91, right hemisphere 169.2
1850 Male, age 80, both hemispheres 161.3
1933 Female, age 85, both hemispheres 158.2
2622 Female, age 67, right hemisphere 148.3
2692 Male, age 74, both hemispheres 147.7
2693 Female, age 94, both hemispheres 134.3
Perirhinal gyrus
nTPM: 164.7
1794 Male, age 80, right hemisphere 174.2
1847 Female, age 91, left hemisphere 168.9
2521 Female, age 94, right hemisphere 164.5
1841 Female, age 85, right hemisphere 161.3
2848 Male, age 76, right hemisphere 154.4
Subiculum
nTPM: 165.9
1977 Female, age 85, both hemispheres 185.8
2438 Female, age 94, left hemisphere 170.5
1901 Male, age 80, both hemispheres 165.2
2042 Male, age 76, both hemispheres 163.2
2619 Male, age 74, both hemispheres 156.1
2729 Female, age 91, right hemisphere 154.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 488.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 488.7
Samples: 197

Max nTPM: 1118.8
Min nTPM: 213.8
Std nTPM: 132.8
Median nTPM: 459.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1118.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 997.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 890.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 881.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 870.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 848.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 847.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 812.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 798.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 726.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 724.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 211.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.2
FF:10169-103B7 60 years, female 291.9
FF:10153-102I9 76 years, female 130.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 287.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 287.4
Samples: 4

Max nTPM: 387.3
Min nTPM: 204.7
Sample A Female 387.3
Sample B Female 247.4
Sample C Male 310.2
Sample D Male 204.7
Entorhinal cortex
nTPM: 229.6
Samples: 4

Max nTPM: 268.6
Min nTPM: 174.4
Sample A Female 212.0
Sample B Female 268.6
Sample C Male 263.4
Sample D Male 174.4
Subiculum
nTPM: 231.2
Samples: 4

Max nTPM: 316.6
Min nTPM: 192.5
Sample A Female 316.6
Sample B Female 212.7
Sample C Male 192.5
Sample D Male 202.9
Ventral hippocampus
nTPM: 254.0
Samples: 4

Max nTPM: 310.5
Min nTPM: 190.7
Sample A Female 245.4
Sample B Female 190.7
Sample C Male 310.5
Sample D Male 269.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 561.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 533.5
Samples: 4

Max nTPM: 554.0
Min nTPM: 499.0
Sample A Male 554.0
Sample B Male 534.3
Sample C Female 546.6
Sample D Female 499.0
Hippocampal formation
nTPM: 561.0
Samples: 4

Max nTPM: 612.7
Min nTPM: 508.1
Sample A Male 591.9
Sample B Male 508.1
Sample C Female 531.2
Sample D Female 612.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
69818338 Antisense, RP_050510_04_H06, Mouse strain C57BL/6J (56 days, male) 12.5
74749928 Antisense, RP_060220_04_F02, Mouse strain C57BL/6J (56 days, male) 12.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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