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RPL8
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:197.2 nTPM
HPA:197.2 nTPM
GTEx:608.2 nTPM
FANTOM5:141.9 Scaled Tags Per Million
Pig:208.9 nTPM
Mouse:623.6 nTPM
Allen mouse:13.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 197.2
Sample id Sample description nTPM
Amygdala
nTPM: 193.9
2514 Male, age 75, right hemisphere 204.4
2695 Female, age 67, right hemisphere 203.2
2517 Female, age 94, left hemisphere 194.9
1987 Female, age 91, left hemisphere 192.1
2814 Male, age 76, right hemisphere 174.8
Basal amygdala
nTPM: 173.0
2827 Female, age 67, right hemisphere 200.3
2609 Male, age 75, right hemisphere 178.1
2110 Male, age 80, left hemisphere 176.5
2243 Female, age 91, right hemisphere 164.7
2685 Female, age 94, left hemisphere 159.6
1955 Male, age 76, both hemispheres 159.0
Central amygdala
nTPM: 188.5
2826 Female, age 94, left hemisphere 236.0
2515 Male, age 75, right hemisphere 204.2
1905 Male, age 76, both hemispheres 178.1
2239 Male, age 80, left hemisphere 172.8
2701 Female, age 91, right hemisphere 151.4
Corticomedial amygdala
nTPM: 172.1
2535 Female, age 67, right hemisphere 189.8
2428 Male, age 75, right hemisphere 186.2
2242 Female, age 91, right hemisphere 171.7
2829 Male, age 80, left hemisphere 167.7
2429 Female, age 94, left hemisphere 164.2
2240 Male, age 76, both hemispheres 152.9
Lateral amygdala
nTPM: 197.2
2830 Female, age 67, right hemisphere 232.5
2516 Male, age 75, right hemisphere 214.4
2534 Female, age 94, left hemisphere 212.8
2256 Male, age 80, left hemisphere 183.8
2255 Female, age 91, right hemisphere 170.9
1883 Male, age 76, both hemispheres 168.7
Stria terminalis, bed nucleus
nTPM: 165.4
1974 Female, age 91, both hemispheres 177.9
2201 Male, age 74, unknown 162.4
2486 Female, age 94, both hemispheres 156.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 608.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 608.2
Samples: 152

Max nTPM: 1513.0
Min nTPM: 253.3
Std nTPM: 205.9
Median nTPM: 571.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 1513.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 1225.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1224.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1184.8
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 1137.0
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1099.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1077.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1041.5
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1014.8
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 987.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 965.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 906.2
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 893.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 889.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 883.4
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 861.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 838.1
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 833.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 821.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 809.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 804.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 802.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 796.6
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 772.1
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 770.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 770.0
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 756.8
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 754.2
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 747.8
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 739.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 739.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 733.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 717.0
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 714.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 713.7
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 703.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 701.0
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 695.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 694.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 690.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 690.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 678.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 675.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 672.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 665.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 652.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 651.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 651.3
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 644.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 641.7
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 639.7
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 635.5
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 633.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 632.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 627.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 626.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 621.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 621.1
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 613.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 613.4
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 613.4
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 613.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 612.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 611.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 610.7
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 610.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 601.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 598.1
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 590.8
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 587.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 581.9
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 581.8
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 581.5
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 579.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 578.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 571.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 570.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 570.4
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 561.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 556.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 553.7
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 552.6
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 548.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 547.4
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 545.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 544.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 544.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 543.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 542.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 542.4
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 542.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 541.6
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 540.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 533.8
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 533.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 531.4
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 531.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 527.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 524.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 520.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 516.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 515.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 512.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 509.5
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 508.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 500.3
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 499.2
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 495.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 495.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 493.1
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 487.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 484.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 484.4
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 480.0
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 471.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 469.7
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 469.3
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 466.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 461.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 459.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 456.4
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 449.6
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 449.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 446.9
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 445.1
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 440.1
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 433.1
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 432.1
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 431.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 428.6
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 426.3
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 416.4
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 413.5
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 410.9
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 409.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 407.3
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 392.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 388.3
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 386.5
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 382.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 369.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 359.8
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 356.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 348.9
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 338.2
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 329.5
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 289.4
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 284.7
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 274.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 273.6
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 258.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 253.3
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 141.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 141.9
FF:10151-102I7 76 years, female 141.9

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 208.9
Pig sample Sample description nTPM
Amygdala
nTPM: 208.9
Samples: 4

Max nTPM: 274.9
Min nTPM: 143.5
Sample A Female 274.9
Sample B Female 208.7
Sample C Male 208.4
Sample D Male 143.5

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 623.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 623.7
Samples: 4

Max nTPM: 686.0
Min nTPM: 596.6
Sample A Male 607.2
Sample B Male 596.6
Sample C Female 686.0
Sample D Female 604.8

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 13.6
69818338 Antisense, RP_050510_04_H06, Mouse strain C57BL/6J (56 days, male) 13.6
74749928 Antisense, RP_060220_04_F02, Mouse strain C57BL/6J (56 days, male) 13.5

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