HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:112.7 nTPM
HPA:112.7 nTPM
GTEx:119.7 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:92.8 nTPM
Mouse:393.1 nTPM
Allen mouse:25.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011689
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.7
Sample id Sample description nTPM
Hippocampus
nTPM: 109.8
1898 Male, age 80, left hemisphere 115.0
1855 Male, age 76, left hemisphere 112.5
2621 Female, age 67, right hemisphere 108.9
2529 Female, age 94, left hemisphere 108.8
1911 Female, age 85, right hemisphere 108.7
2148 Female, age 91, left hemisphere 104.8
Dentate gyrus
nTPM: 109.9
2010 Male, age 76, both hemispheres 119.9
2246 Female, age 85, both hemispheres 111.5
2528 Male, age 74, both hemispheres 110.8
1927 Female, age 91, both hemispheres 109.0
2531 Female, age 67, both hemispheres 105.8
2530 Female, age 94, left hemisphere 102.3
Entorhinal gyrus
nTPM: 106.3
2117 Female, age 91, right hemisphere 111.5
1938 Female, age 85, left hemisphere 108.6
1787 Male, age 76, left hemisphere 107.8
2764 Male, age 80, right hemisphere 105.5
2686 Male, age 75, right hemisphere 102.7
2613 Female, age 94, left hemisphere 102.0
Hippocampus, CA1
nTPM: 112.2
2749 Male, age 80, left hemisphere 117.3
2045 Male, age 76, both hemispheres 116.7
1873 Female, age 85, both hemispheres 113.0
2527 Male, age 74, both hemispheres 107.8
2082 Female, age 91, right hemisphere 106.1
Hippocampus, CA2
nTPM: 108.6
1892 Male, age 76, both hemispheres 114.4
2249 Male, age 74, both hemispheres 112.4
1940 Female, age 85, left hemisphere 109.5
1963 Male, age 80, left hemisphere 107.2
2113 Female, age 91, right hemisphere 105.0
2437 Female, age 94, left hemisphere 103.1
Hippocampus, CA3
nTPM: 112.7
1867 Male, age 76, both hemispheres 126.7
2137 Male, age 80, left hemisphere 117.1
1891 Female, age 85, both hemispheres 110.4
2436 Male, age 74, both hemispheres 110.0
2620 Female, age 94, left hemisphere 108.7
2861 Female, age 67, both hemispheres 102.9
Parahippocampal cortex
nTPM: 107.3
2018 Male, age 76, both hemispheres 117.6
2250 Female, age 67, right hemisphere 113.5
1933 Female, age 85, both hemispheres 111.5
1850 Male, age 80, both hemispheres 109.0
1990 Female, age 91, right hemisphere 107.1
2245 Female, age 91, both hemispheres 105.3
2693 Female, age 94, both hemispheres 104.6
2532 Female, age 72, left hemisphere 103.3
2692 Male, age 74, both hemispheres 101.3
2622 Female, age 67, right hemisphere 99.9
Perirhinal gyrus
nTPM: 108.3
1841 Female, age 85, right hemisphere 112.4
1847 Female, age 91, left hemisphere 109.8
2521 Female, age 94, right hemisphere 108.6
1794 Male, age 80, right hemisphere 108.4
2848 Male, age 76, right hemisphere 102.3
Subiculum
nTPM: 110.2
2042 Male, age 76, both hemispheres 118.8
1901 Male, age 80, both hemispheres 112.5
1977 Female, age 85, both hemispheres 112.2
2619 Male, age 74, both hemispheres 109.4
2729 Female, age 91, right hemisphere 108.0
2438 Female, age 94, left hemisphere 100.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 119.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 119.7
Samples: 197

Max nTPM: 956.7
Min nTPM: 72.8
Std nTPM: 70.7
Median nTPM: 105.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 956.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 350.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 317.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 283.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 269.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 214.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 205.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 204.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 191.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 191.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 189.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.8
Samples: 4

Max nTPM: 120.5
Min nTPM: 71.2
Sample A Female 120.5
Sample B Female 95.4
Sample C Male 84.2
Sample D Male 71.2
Entorhinal cortex
nTPM: 70.0
Samples: 4

Max nTPM: 77.1
Min nTPM: 56.7
Sample A Female 76.7
Sample B Female 77.1
Sample C Male 69.4
Sample D Male 56.7
Subiculum
nTPM: 74.6
Samples: 4

Max nTPM: 93.4
Min nTPM: 66.5
Sample A Female 93.4
Sample B Female 70.5
Sample C Male 67.9
Sample D Male 66.5
Ventral hippocampus
nTPM: 82.8
Samples: 4

Max nTPM: 94.0
Min nTPM: 62.6
Sample A Female 85.0
Sample B Female 62.6
Sample C Male 94.0
Sample D Male 89.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 393.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 329.5
Samples: 4

Max nTPM: 351.9
Min nTPM: 315.2
Sample A Male 315.2
Sample B Male 325.5
Sample C Female 351.9
Sample D Female 325.4
Hippocampal formation
nTPM: 393.1
Samples: 4

Max nTPM: 425.2
Min nTPM: 367.0
Sample A Male 425.2
Sample B Male 379.9
Sample C Female 400.4
Sample D Female 367.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.5
68924419 Antisense, RP_050303_02_C11, Mouse strain C57BL/6J (56 days, male) 25.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.