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RPL29
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:669.4 nTPM
HPA:669.4 nTPM
GTEx:949.9 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:183.3 nTPM
Mouse:564.7 nTPM

AMYGDALA - HPA Brain RNA-seq
Max nTPM 669.4
Sample id Sample description nTPM
Amygdala
nTPM: 669.4
2514 Male, age 75, right hemisphere 690.3
2695 Female, age 67, right hemisphere 686.1
1987 Female, age 91, left hemisphere 661.8
2517 Female, age 94, left hemisphere 660.1
2814 Male, age 76, right hemisphere 648.8
Basal amygdala
nTPM: 651.2
2827 Female, age 67, right hemisphere 685.5
2609 Male, age 75, right hemisphere 661.3
2110 Male, age 80, left hemisphere 642.6
2243 Female, age 91, right hemisphere 641.6
2685 Female, age 94, left hemisphere 640.6
1955 Male, age 76, both hemispheres 635.5
Central amygdala
nTPM: 662.9
2826 Female, age 94, left hemisphere 722.8
2515 Male, age 75, right hemisphere 681.0
1905 Male, age 76, both hemispheres 643.0
2239 Male, age 80, left hemisphere 642.4
2701 Female, age 91, right hemisphere 625.2
Corticomedial amygdala
nTPM: 648.0
2428 Male, age 75, right hemisphere 664.4
2535 Female, age 67, right hemisphere 656.0
2242 Female, age 91, right hemisphere 651.6
2240 Male, age 76, both hemispheres 645.6
2829 Male, age 80, left hemisphere 641.8
2429 Female, age 94, left hemisphere 628.5
Lateral amygdala
nTPM: 666.9
2830 Female, age 67, right hemisphere 706.9
2516 Male, age 75, right hemisphere 695.1
2534 Female, age 94, left hemisphere 674.6
2256 Male, age 80, left hemisphere 653.9
2255 Female, age 91, right hemisphere 640.4
1883 Male, age 76, both hemispheres 630.3
Stria terminalis, bed nucleus
nTPM: 621.6
1974 Female, age 91, both hemispheres 641.3
2201 Male, age 74, unknown 620.3
2486 Female, age 94, both hemispheres 603.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 949.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 949.9
Samples: 152

Max nTPM: 2412.9
Min nTPM: 537.4
Std nTPM: 344.4
Median nTPM: 869.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 2412.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2336.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2119.1
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2022.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1979.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 1902.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1762.1
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1744.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1713.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1473.5
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1470.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1463.9
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1455.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1451.9
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1422.7
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1408.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1363.7
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1315.0
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1310.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1275.5
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1223.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1184.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1167.5
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1161.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1147.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1140.3
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1134.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1127.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1113.2
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1101.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1093.4
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1092.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1062.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1059.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1057.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1054.2
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1054.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1050.5
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1049.8
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1044.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1025.6
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1023.7
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1023.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1022.2
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1018.2
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1015.7
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1011.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 999.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 996.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 986.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 978.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 972.5
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 968.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 960.8
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 959.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 956.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 952.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 951.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 949.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 945.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 941.6
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 931.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 919.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 911.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 908.2
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 907.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 904.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 904.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 903.8
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 900.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 889.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 882.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 880.5
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 877.2
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 875.7
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 872.6
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 867.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 865.6
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 865.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 864.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 863.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 860.3
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 859.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 859.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 858.2
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 857.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 855.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 853.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 843.8
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 828.9
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 826.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 816.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 814.3
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 809.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 806.9
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 793.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 793.3
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 789.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 786.5
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 784.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 772.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 769.7
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 760.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 752.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 748.4
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 738.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 737.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 737.7
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 734.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 730.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 730.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 728.0
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 721.3
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 720.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 719.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 718.5
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 716.7
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 714.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 697.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 693.9
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 690.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 688.9
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 681.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 681.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 680.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 667.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 666.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 666.5
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 666.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 657.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 650.2
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 649.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 642.5
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 639.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 638.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 635.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 622.3
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 619.3
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 616.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 616.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 614.5
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 612.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 607.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 599.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 597.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 594.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 590.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 576.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 565.4
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 551.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 541.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 537.4
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 61.2
FF:10151-102I7 76 years, female 61.2

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 183.3
Pig sample Sample description nTPM
Amygdala
nTPM: 183.3
Samples: 4

Max nTPM: 226.4
Min nTPM: 122.3
Sample A Female 226.4
Sample B Female 196.5
Sample C Male 187.8
Sample D Male 122.3

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 564.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 564.7
Samples: 4

Max nTPM: 608.9
Min nTPM: 509.3
Sample A Male 509.3
Sample B Male 591.1
Sample C Female 608.9
Sample D Female 549.5

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