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RPL29
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:229.3 nTPM
GTEx:229.3 nTPM
FANTOM5:94.5 Scaled Tags Per Million
Pig:69.7 nTPM
Mouse:442.7 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 229.3
GTEx sample id Sample description nTPM
Retina
Average nTPM: 229.3
Samples: 105

Max nTPM: 449.4
Min nTPM: 92.0
Std nTPM: 62.4
Median nTPM:
218_1 71 years, female 449.4
321_1 62 years, female 362.8
353_1 82 years, female 341.9
452_1 88 years, female 333.6
379_1 60 years, male 322.1
320_1 89 years, female 319.9
352_1 62 years, male 319.9
319_1 81 years, male 317.6
322_1 76 years, male 311.2
356_1 87 years, female 306.7
354_1 81 years, female 306.0
355_1 70 years, female 305.6
349_1 83 years, male 301.2
376_1 75 years, female 300.4
351_1 91 years, male 299.7
375_1 74 years, female 298.6
377_1 82 years, female 294.5
243_1 75 years, male 291.1
447_1 81 years, male 285.6
389_1 86 years, female 284.7
384_1 83 years, male 280.3
177_1 74 years, male 278.4
350_1 84 years, female 278.4
295_1 61 years, female 278.3
163_1 78 years, male 277.1
394_1 75 years, female 276.5
386_1 76 years, male 274.0
237_1 82 years, male 271.5
35_1 74 years, female 268.0
317_1 60 years, male 259.4
335_1 73 years, female 258.0
347_1 72 years, male 257.8
4_1 88 years, female 255.3
99_1 64 years, male 255.0
6_1 73 years, female 254.2
506_1 65 years, male 251.9
405_1 91 years, male 249.4
2_1 77 years, female 245.8
172_1 72 years, female 245.7
17_1 71 years, male 244.6
404_1 82 years, female 244.6
145_1 84 years, male 243.0
318_1 68 years, male 240.0
153_1 70 years, female 239.4
526_1 61 years, male 239.4
503_1 68 years, male 238.5
189_1 76 years, male 237.9
173_1 67 years, male 237.8
246_1 77 years, male 237.0
293_1 68 years, female 236.8
406_1 79 years, male 236.5
316_1 62 years, male 234.5
396_1 62 years, male 232.1
292_1 71 years, male 230.2
229_1 69 years, female 228.6
425_1 59 years, female 227.9
286_1 68 years, female 225.7
120_1 70 years, female 224.5
217_1 76 years, male 224.3
41_1 94 years, female 222.8
307_1 66 years, female 222.2
251_1 78 years, male 221.5
291_1 76 years, male 219.4
137_1 83 years, male 218.8
480_1 63 years, male 217.1
311_1 78 years, male 214.8
264_1 73 years, female 211.3
115_1 83 years, male 209.5
517_1 88 years, male 208.5
348_1 84 years, male 207.1
126_1 63 years, male 205.7
254_1 77 years, female 200.7
18_1 88 years, male 198.8
265_1 87 years, male 197.0
109_1 81 years, female 194.7
266_1 85 years, male 191.4
518_1 75 years, female 189.9
468_1 89 years, male 185.6
288_1 66 years, female 184.7
42_1 85 years, male 184.4
315_1 62 years, female 183.7
324_1 76 years, male 182.2
117_1 61 years, male 178.6
9_1 66 years, female 174.4
314_1 67 years, male 174.4
81_1 67 years, male 173.5
499_1 55 years, female 171.9
119_1 70 years, female 171.1
495_1 57 years, female 170.4
139_1 64 years, female 166.2
162_1 79 years, female 163.2
142_1 61 years, female 161.7
308_1 70 years, female 160.4
313_1 79 years, female 159.7
414_1 84 years, female 145.6
415_1 77 years, female 143.3
32_1 67 years, male 134.5
43_1 64 years, female 129.7
89_1 63 years, male 126.4
466_1 57 years, female 122.9
501_1 88 years, male 118.0
491_1 89 years, female 109.3
149_1 88 years, male 97.5
413_1 59 years, female 92.4
490_1 67 years, female 92.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 94.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 94.5
FF:10030-101E3 24-65 years, mixed 94.5

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 69.7
Pig sample Sample description nTPM
Retina
nTPM: 69.8
Samples: 4

Max nTPM: 76.0
Min nTPM: 61.9
Sample A Female 66.5
Sample B Female 74.6
Sample C Male 76.0
Sample D Male 61.9

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 442.7
Mouse sample Sample description nTPM
Retina
nTPM: 442.7
Samples: 4

Max nTPM: 602.8
Min nTPM: 361.0
Sample A Male 428.5
Sample B Male 378.4
Sample C Female 602.8
Sample D Female 361.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.