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RPL29
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:684.7 nTPM
HPA:684.7 nTPM
FANTOM5:59.1 Scaled Tags Per Million
Pig:241.6 nTPM
Mouse:320.2 nTPM

THALAMUS - HPA Brain RNA-seq
Max nTPM 684.7
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 651.4
2396 Male, age 61, right hemisphere 691.8
2032 Female, age 42, unknown 632.2
2497 Male, age 66, unknown 630.1
Centromedial thalamic nucleus
nTPM: 649.3
2279 Female, age 85, left hemisphere 666.0
2401 Male, age 76, right hemisphere 632.5
Habenula
nTPM: 626.8
1957 Male, age 80, both hemispheres 635.8
2252 Male, age 62, unknown 628.6
2203 Male, age 61, left hemisphere 622.9
2276 Male, age 66, unknown 619.7
Lateral geniculate body
nTPM: 638.7
2857 Male, age 74, right hemisphere 657.3
2575 Female, age 94, right hemisphere 655.4
2841 Male, age 80, both hemispheres 641.7
2659 Male, age 66, unknown 638.0
2035 Female, age 72, unknown 637.7
1953 Male, age 62, unknown 635.1
2399 Male, age 61, left hemisphere 623.5
2106 Female, age 67, right hemisphere 620.9
Lateral thalamic nuclei
nTPM: 644.7
2573 Female, age 94, left hemisphere 658.5
2577 Male, age 74, both hemispheres 647.6
2765 Female, age 67, both hemispheres 646.6
2661 Female, age 72, unknown 645.3
1903 Male, age 76, left hemisphere 625.6
Medial dorsal thalamic nucleus
nTPM: 647.4
2572 Female, age 94, right hemisphere 725.0
1971 Male, age 61, right hemisphere 669.8
1810 Male, age 48, unknown 659.5
1930 Female, age 42, unknown 652.1
1859 Male, age 76, both hemispheres 644.8
2039 Female, age 72, unknown 640.5
2492 Male, age 75, right hemisphere 635.6
2576 Male, age 74, both hemispheres 635.0
2402 Female, age 67, both hemispheres 633.0
2498 Male, age 66, unknown 632.8
2660 Female, age 72, unknown 629.6
2026 Male, age 62, unknown 629.5
2283 Male, age 80, right hemisphere 628.5
Medial geniculate body
nTPM: 655.7
2571 Male, age 75, right hemisphere 711.5
2650 Female, age 94, left hemisphere 657.3
2207 Male, age 80, right hemisphere 650.5
2049 Male, age 76, both hemispheres 644.8
1811 Female, age 42, unknown 642.9
2217 Female, age 72, unknown 642.2
2657 Male, age 74, right hemisphere 641.0
Nucleus reuniens
nTPM: 649.8
2210 Female, age 85, left hemisphere 659.1
2205 Male, age 80, left hemisphere 646.8
2212 Female, age 67, left hemisphere 643.6
Nucleus rhomboideus
nTPM: 642.7
2213 Female, age 67, left hemisphere 645.8
2280 Female, age 85, left hemisphere 645.4
2206 Male, age 80, both hemispheres 636.8
Posterior thalamic nucleus
nTPM: 684.7
2649 Female, age 94, both hemispheres 799.1
2655 Male, age 74, right hemisphere 663.0
2266 Male, age 76, right hemisphere 645.2
2495 Female, age 67, right hemisphere 631.4
Pulvinar
nTPM: 639.0
2499 Male, age 66, unknown 659.5
2496 Female, age 67, right hemisphere 648.7
2214 Male, age 76, right hemisphere 644.3
1972 Male, age 62, unknown 640.0
2724 Male, age 74, right hemisphere 637.1
1929 Male, age 48, unknown 636.8
2398 Male, age 61, left hemisphere 635.2
1932 Male, age 80, right hemisphere 633.4
2582 Female, age 72, unknown 628.8
1899 Female, age 42, unknown 626.7
Subthalamic nucleus
nTPM: 648.1
2124 Male, age 62, unknown 674.6
2282 Male, age 61, both hemispheres 656.0
2056 Female, age 72, unknown 655.9
2275 Male, age 66, unknown 655.2
2658 Male, age 74, both hemispheres 647.5
2779 Female, age 42, unknown 643.0
2216 Male, age 48, unknown 635.8
2406 Female, age 72, unknown 616.9
Ventral posterolateral thalamic nucleus
nTPM: 636.5
2397 Male, age 61, right hemisphere 654.3
2197 Male, age 80, both hemispheres 647.4
2578 Male, age 74, both hemispheres 643.6
2740 Male, age 76, right hemisphere 641.4
2570 Male, age 75, right hemisphere 619.9
2581 Female, age 72, unknown 612.5
Ventral posteromedial thalamic nucleus
nTPM: 639.1
2202 Male, age 61, left hemisphere 653.6
2127 Male, age 76, right hemisphere 648.8
2653 Male, age 74, both hemispheres 637.2
2758 Male, age 80, both hemispheres 630.6
2281 Male, age 75, right hemisphere 625.4
Ventral thalamic nuclei
nTPM: 644.4
2291 Female, age 72, unknown 660.2
2580 Male, age 66, unknown 652.8
1860 Male, age 76, both hemispheres 652.0
2285 Male, age 62, unknown 646.1
1912 Female, age 42, unknown 645.4
1845 Male, age 48, unknown 644.4
2204 Male, age 80, both hemispheres 638.5
2652 Male, age 74, left hemisphere 637.6
2858 Female, age 72, unknown 623.1
Ventromedial nucleus
nTPM: 642.0
1982 Female, age 72, unknown 661.1
1822 Female, age 42, unknown 622.9
Zona incerta
nTPM: 634.7
2215 Male, age 66, unknown 646.6
2403 Male, age 62, unknown 638.9
2822 Male, age 74, right hemisphere 638.4
2208 Male, age 80, right hemisphere 627.4
2663 Female, age 72, unknown 622.2

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 59.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 59.1
FF:10154-103A1 76 years, female 59.1

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 241.6
Pig sample Sample description nTPM
Thalamus
nTPM: 241.6
Samples: 4

Max nTPM: 297.4
Min nTPM: 176.1
Sample A Female 280.0
Sample B Female 176.1
Sample C Male 297.4
Sample D Male 212.7

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 320.2
Mouse sample Sample description nTPM
Thalamus
nTPM: 320.2
Samples: 4

Max nTPM: 363.8
Min nTPM: 275.4
Sample A Male 363.8
Sample B Male 275.4
Sample C Female 358.5
Sample D Female 283.2

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